RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 FBXO32Q969P5 355 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZNF512BQ96KM6 892 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 LXNQ9BS40 222 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 APOL5Q9BWW9 433 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SAYSD1Q9NPB0 183 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 NDE1Q9NXR1 346 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PCSK1NQ9UHG2 260 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PCDHB15Q9Y5E8 787 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PPP2R3BQ9Y5P8 575 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SNX9Q9Y5X1 595 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CHUKO15111 745 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MUSKO15146 869 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 HNRNPRO43390 633 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 CYTH3O43739 400 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ACSL4O60488 711 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PYGMP11217 842 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DNAJB2P25686 324 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ETFBP38117 255 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PLTPP55058 493 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 TMPRSS15P98073 1019 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DAB2P98082 770 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MDM2Q00987 491 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 NAA30Q147X3 362 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ANGPT1Q15389 498 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 FAM133BQ5BKY9 247 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 MTHFD1LQ6UB35 978 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 KRT77Q7Z794 578 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 KIRREL3Q8IZU9 778 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZNF614Q8N883 585 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 JADE3Q92613 823 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 KRT35Q92764 455 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MAP3K14Q99558 947 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 OMDQ99983 421 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MRPL9Q9BYD2 267 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 SAMSN1Q9NSI8 373 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 SOHLH2Q9NX45 425 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SMARCAL1Q9NZC9 954 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CLASP2O75122 1294 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 PDHA1P08559 390 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CDH2P19022 906 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 AKAP5P24588 427 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 GNALP38405 381 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CAV1Q03135 178 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PTH1RQ03431 593 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ACTN3Q08043 901 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 IKBKEQ14164 716 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DCAF6Q58WW2 860 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PIP4K2CQ8TBX8 421 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CLIC6Q96NY7 704 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MXD3Q9BW11 206 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SENP6Q9GZR1 1112 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 BRD8Q9H0E9 1235 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 TMEM165Q9HC07 324 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 GID8Q9NWU2 228 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 KIAA1468Q9P260 1216 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 RWDD2AQ9UIY3 292 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MINPP1Q9UNW1 487 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MAP3K1Q13233 1512 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CTNND1O60716 968 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ATG7O95352 703 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PSMA4P25789 261 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 CLCN1P35523 988 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 GNGT1P63211 74 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DR1Q01658 176 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SRSF11Q05519 484 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 CDC16Q13042 620 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 PCSK7Q16549 785 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 XKR3Q5GH77 459 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 COMMD2Q86X83 199 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DIS3LQ8TF46 1054 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZC3H7BQ9UGR2 993 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 AXIN2Q9Y2T1 843 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 METP08581 1390 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CFAP43Q8NDM7 1665 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 C2orf81A6NN90 581 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ONECUT3O60422 494 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 RPN2P04844 631 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CARSP49589 748 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 PMS2P54278 862 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 GPC5P78333 572 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 TAF13Q15543 124 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MIIPQ5JXC2 388 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ADGRF4Q8IZF3 695 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 RNASE11Q8TAA1 199 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 FRMD6Q96NE9 622 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PKD2L2Q9NZM6 624 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ANAPC2Q9UJX6 822 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 EPN1Q9Y6I3 576 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 F5H6K3 240 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MAPK13O15264 365 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CTIFO43310 598 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 PRKAB2O43741 272 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 VPS4BO75351 444 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 RHOBTB3O94955 611 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ESRRAP11474 423 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 AMD1P17707 334 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 GPC1P35052 558 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MCAMP43121 646 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms