RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TMOD2Q9NZR1 351 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TAGLN3Q9UI15 199 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 PTBP2Q9UKA9 531 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GTF3C4Q9UKN8 822 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 CNOT11Q9UKZ1 510 aaKnown RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 PACSIN2Q9UNF0 486 aaPredicted RBP5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM33Q9UPN9 1127 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 GDAQ9Y2T3 454 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 IFT52Q9Y366 437 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 DTNAQ9Y4J8 743 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANGPTL3Q9Y5C1 460 aa5.9□□□□□ -1.46
VTI1BP4-201ENST00000427516 TOPAZ1Q8N9V7 1692 aa5.9□□□□□ -1.47
VTI1BP4-201ENST00000427516 RREB1Q92766 1687 aa5.9□□□□□ -1.47
VTI1BP4-201ENST00000427516 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF532Q9HCE3 1301 aa5.9□□□□□ -1.47
VTI1BP4-201ENST00000427516 USP54Q70EL1 1684 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 BTBD11A6QL63 1104 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 J3QL48 77 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ALOX15BO15296 676 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 GPAA1O43292 621 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 S100BP04271 92 aaPredicted RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 NTRK1P04629 796 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 MYL4P12829 197 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SCG2P13521 617 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ETS2P15036 469 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATF2P15336 505 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TSHRP16473 764 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ENDOUP21128 410 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 CA4P22748 312 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 PRDX6P30041 224 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 COPB2P35606 906 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 VPS41P49754 854 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 NCKAP1LP55160 1127 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 WNT7BP56706 349 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 RPS3AP61247 264 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 PPP2R5CQ13362 524 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 LRRC14Q15048 493 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TCEAL1Q15170 157 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 CYP1B1Q16678 543 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMEM266Q2M3C6 531 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRIM16LQ309B1 348 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 EDRF1Q3B7T1 1238 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 AKAP4Q5JQC9 854 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TEDDM1Q5T9Z0 273 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATG16L1Q676U5 607 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 HGSNATQ68CP4 663 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 DUS1LQ6P1R4 473 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TPTE2Q6XPS3 522 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 LPCAT2Q7L5N7 544 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ITIH5Q86UX2 942 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 NT5DC3Q86UY8 548 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF410Q86VK4 478 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TPH2Q8IWU9 490 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SRRM1Q8IYB3 904 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 AFAP1L2Q8N4X5 818 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANKRD13CQ8N6S4 541 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATP6V0D2Q8N8Y2 350 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 MIGA1Q8NAN2 632 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 FANCBQ8NB91 859 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ADCY4Q8NFM4 1077 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANGPTL6Q8NI99 470 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 GRPEL2Q8TAA5 225 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SUN5Q8TC36 379 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 S100ZQ8WXG8 99 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 DLG3Q92796 817 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 CMTM5Q96DZ9 223 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF512BQ96KM6 892 aaPredicted RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 CNDP2Q96KP4 475 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 C7orf26Q96N11 449 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCNK16Q96T55 309 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 DUSP9Q99956 384 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 NUDT12Q9BQG2 462 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 GPATCH1Q9BRR8 931 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC39A3Q9BRY0 314 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 METTL22Q9BUU2 404 aaPredicted RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 WDR12Q9GZL7 423 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 NAPBQ9H115 298 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 GBA3Q9H227 469 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 BLZF1Q9H2G9 400 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 S100A14Q9HCY8 104 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 PICK1Q9NRD5 415 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 INIPQ9NRY2 104 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 MCM9Q9NXL9 1143 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCNK4Q9NYG8 393 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLAIN2Q9P270 581 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SUCOQ9UBS9 1254 aaKnown RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLHL3Q9UH77 587 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 GGT7Q9UJ14 662 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 FBXO9Q9UK97 447 aaPredicted RBP5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SOX13Q9UN79 622 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 TFR2Q9UP52 801 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ERVK-11Q9UQG0 969 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 LZTS1Q9Y250 596 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATP11BQ9Y2G3 1177 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
VTI1BP4-201ENST00000427516 PEAK1Q9H792 1746 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 A0A087X0B3 334 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms