RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 REXO4Q9GZR2 422 aaKnown RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 UPF2Q9HAU5 1272 aaKnown RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 GALNT9Q9HCQ5 603 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 TOPORSQ9NS56 1045 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 CHPF2Q9P2E5 772 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 KCNE5Q9UJ90 142 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 TRHDEQ9UKU6 1024 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 CENPJQ9HC77 1338 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 ABCC11Q96J66 1382 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 ZFYVE9O95405 1425 aa6.13□□□□□ -1.43
LINC00458-202ENST00000427299 COL3A1P02461 1466 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-202ENST00000427299 FZD9O00144 591 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 AKR1B10O60218 316 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ITGB6P18564 788 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ENPP1P22413 925 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 FGFR4P22455 802 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 GCSHP23434 173 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ADSLP30566 484 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-202ENST00000427299 MRPS35P82673 323 aaKnown RBP6.12□□□□□ -1.43
LINC00458-202ENST00000427299 MCL1Q07820 350 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ITKQ08881 620 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 SLFN5Q08AF3 891 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 NPATQ14207 1427 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 BECN1Q14457 450 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 TTF1Q15361 905 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-202ENST00000427299 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ARHGAP31Q2M1Z3 1444 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ODR4Q5SWX8 454 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 AFMIDQ63HM1 303 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 RPGRIP1LQ68CZ1 1315 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 MON2Q7Z3U7 1717 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ARHGEF25Q86VW2 580 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 CERS3Q8IU89 383 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 GPR156Q8NFN8 814 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 FBXO18Q8NFZ0 1043 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 ZNF384Q8TF68 577 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 RIN2Q8WYP3 895 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-202ENST00000427299 CFAP53Q96M91 514 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 MRI1Q9BV20 369 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 SLC52A1Q9NWF4 448 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 DPP7Q9UHL4 492 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 SPEF1Q9Y4P9 236 aa6.12□□□□□ -1.43
LINC00458-202ENST00000427299 SETD1AO15047 1707 aaKnown RBP6.11□□□□□ -1.43
LINC00458-202ENST00000427299 TMEM131LA2VDJ0 1609 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 NLRP1Q9C000 1473 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 TNKSO95271 1327 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 PROP1O75360 226 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
LINC00458-202ENST00000427299 SREBF1P36956 1147 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 EPHA10Q5JZY3 1008 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 RAVER1Q8IY67 606 aaKnown RBP6.11□□□□□ -1.43
LINC00458-202ENST00000427299 ACTRT2Q8TDY3 377 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 TSPEARQ8WU66 669 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 RAX2Q96IS3 184 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 ORAI2Q96SN7 254 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 AIFM2Q9BRQ8 373 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 CASS4Q9NQ75 786 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 LRIT1Q9P2V4 623 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 AKAP12Q02952 1782 aa6.11□□□□□ -1.43
LINC00458-202ENST00000427299 DLC1Q96QB1 1528 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 DLG5Q8TDM6 1919 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 ECHS1P30084 290 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 NEK2P51955 445 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 EPHB1P54762 984 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 HSD11B2P80365 405 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 CYP2A13Q16696 494 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 GJC2Q5T442 439 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-202ENST00000427299 LMBR1Q8WVP7 490 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 HOXB13Q92826 284 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-202ENST00000427299 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 AHCYL2Q96HN2 611 aaKnown RBP6.1□□□□□ -1.43
LINC00458-202ENST00000427299 ACAP3Q96P50 834 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 KLK15Q9H2R5 256 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 SCOCQ9UIL1 159 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 G3BP2Q9UN86 482 aaKnown RBP6.1□□□□□ -1.43
LINC00458-202ENST00000427299 N4BP2Q86UW6 1770 aaPredicted RBP6.1□□□□□ -1.43
LINC00458-202ENST00000427299 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
LINC00458-202ENST00000427299 AATKQ6ZMQ8 1374 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 FMN2Q9NZ56 1722 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 DNAJC9-AS1A6NH13 148 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 KIF3BO15066 747 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 PRSS23O95084 383 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 GPANK1O95872 356 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 GUCY1A2P33402 732 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 CDK17Q00537 523 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 KLF1Q13351 362 aaPredicted RBP6.09□□□□□ -1.43
LINC00458-202ENST00000427299 UBXN2BQ14CS0 331 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 ADRM1Q16186 407 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 NFE2Q16621 373 aaPredicted RBP6.09□□□□□ -1.43
LINC00458-202ENST00000427299 HSP90AB2PQ58FF8 381 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 CMIPQ8IY22 773 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 JDP2Q8WYK2 163 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 SLC13A1Q9BZW2 595 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms