RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PSTPIP1O43586 416 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 CNOT3O75175 753 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 TKTP29401 623 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 CHRNB3Q05901 458 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 COG2Q14746 738 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 MFSD14CQ5VZR4 134 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 IL17REQ8NFR9 667 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 PUS7LQ9H0K6 701 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 FAM47E-STBD1D6RA91 191 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 SLC16A4O15374 487 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 PTRHD1Q6GMV3 140 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 AIM2O14862 343 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 KIZQ2M2Z5 673 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 OSCP1Q8WVF1 389 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 KIF12Q96FN5 646 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 EFCAB1Q9HAE3 211 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 JPH1Q9HDC5 661 aaPredicted RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 SLC9A5Q14940 896 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 SVOPQ8N4V2 548 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 E2F7Q96AV8 911 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 PTPN12Q05209 780 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 ARMC6Q6NXE6 501 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 KRT77Q7Z794 578 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 LRRC49Q8IUZ0 686 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 RAB6BQ9NRW1 208 aa15.04■□□□□ -0
PTPN13-203ENST00000427191 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
PTPN13-203ENST00000427191 SAMD9Q5K651 1589 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 CLRN2A0PK11 232 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 HEATR9A2RTY3 570 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 POTEMA6NI47 508 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 POTECB2RU33 542 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 H3BMM5 538 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 KPNA4O00629 521 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 VPS33AQ96AX1 596 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 UBE2OQ9C0C9 1292 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 KLHL4Q9C0H6 718 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 SERHL2Q9H4I8 314 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 SERHLQ9NQF3 203 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 FAM217BQ9NTX9 383 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 KLHL3Q9UH77 587 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 VWA5AO00534 786 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 TIMM44O43615 452 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 GRIK1P39086 918 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 SDE2Q6IQ49 451 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 TTC30BQ8N4P2 665 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 DCLRE1BQ9H816 532 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 ATP9BO43861 1147 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 PCSK1P29120 753 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 TGM3Q08188 693 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 NFX1Q12986 1120 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 ZNF211Q13398 564 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 ZNF467Q7Z7K2 595 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 GLMNQ92990 594 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 RPAP3Q9H6T3 665 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 RGS18Q9NS28 235 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 DGAT1O75907 488 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 ADORA2BP29275 332 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 SERPINB8P50452 374 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 MMRN1Q13201 1228 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 CCDC149Q6ZUS6 474 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 HNRNPLLQ8WVV9 542 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 HERC5Q9UII4 1024 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 PCDHA10Q9Y5I2 948 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 ESYT3A0FGR9 886 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 PSMD14O00487 310 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 ECDO95905 644 aaPredicted RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 ATP1A1P05023 1023 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 STN1Q9H668 368 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 B2RBV5 119 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 F8W810 466 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 EEF2KO00418 725 aaKnown RBP15.03■□□□□ -0
PTPN13-203ENST00000427191 STK25O00506 426 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 CPB1P15086 417 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 RAD23AP54725 363 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 SLC7A14Q8TBB6 771 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 ACAD9Q9H845 621 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 FAM153AQ9UHL3 310 aa15.03■□□□□ -0
PTPN13-203ENST00000427191 FKBP6O75344 327 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 USP17L8P0C7I0 530 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 PIK3R1P27986 724 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 EPS8Q12929 822 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 NAB2Q15742 525 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 DALRD3Q5D0E6 543 aaKnown RBP15.02■□□□□ -0
PTPN13-203ENST00000427191 TRIQKQ629K1 86 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 CLEC17AQ6ZS10 378 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 OSBP2Q969R2 916 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 SPRTNQ9H040 489 aaPredicted RBP15.02■□□□□ -0
PTPN13-203ENST00000427191 ISCUQ9H1K1 167 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 A0A1B0GTH6 734 aa15.02■□□□□ -0
PTPN13-203ENST00000427191 TMEM120BA0PK00 339 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms