RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SEM1Q6ZVN7 128 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 CHST15Q7LFX5 561 aaPredicted RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 COL23A1Q86Y22 540 aaPredicted RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 TMEM132CQ8N3T6 1108 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 SUPT20HQ8NEM7 779 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 PLBD2Q8NHP8 589 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 TBC1D15Q8TC07 691 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 LRTOMTQ8WZ04 291 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 CAVIN3Q969G5 261 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 NACC2Q96BF6 587 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 CRAMP1Q96RY5 1269 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 TLR10Q9BXR5 811 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 MRPL46Q9H2W6 279 aaKnown RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 BRD9Q9H8M2 597 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 ZMAT3Q9HA38 289 aaKnown RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 HSFX1Q9UBD0 423 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 TESQ9UGI8 421 aaKnown RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 ZNHIT2Q9UHR6 403 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 PCDHA6Q9UN73 950 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 L1RE1Q9UN81 338 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 MTO1Q9Y2Z2 717 aaKnown RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 NOX1Q9Y5S8 564 aa3.04□□□□□ -1.92
PTPRC-208ENST00000427110 EPN1Q9Y6I3 576 aaPredicted RBP3.04□□□□□ -1.92
PTPRC-208ENST00000427110 PIPSLA2A3N6 862 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 ZNF785A8K8V0 405 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 NT5C1B-RDH14C9J2C7 533 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 APAF1O14727 1248 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PMM2O15305 246 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PHGDHO43175 533 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 MAP4K4O95819 1239 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 GPANK1O95872 356 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 IFIT2P09913 472 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 EGR2P11161 476 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 FCER1AP12319 257 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 GCSHP23434 173 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SLC7A1P30825 629 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 CLK3P49761 638 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 NEK3P51956 506 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SEC24CP53992 1094 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PSMC1P62191 440 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 EXOSC9Q06265 439 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SLFN5Q08AF3 891 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 OS9Q13438 667 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 GALEQ14376 348 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 GEN1Q17RS7 908 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 UTP14CQ5TAP6 766 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 IL31Q6EBC2 164 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SWSAP1Q6NVH7 229 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PPP1R3BQ86XI6 285 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 FAM90A1Q86YD7 464 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 KIAA0319LQ8IZA0 1049 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 FITM2Q8N6M3 262 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 IL17RDQ8NFM7 739 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PJA1Q8NG27 643 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 Q96MF0 132 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 C22orf23Q9BZE7 217 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 LRRC27Q9C0I9 530 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 REXO4Q9GZR2 422 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 BHMT2Q9H2M3 363 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 TOR3AQ9H497 397 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 RNPEPQ9H4A4 650 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PRDM13Q9H4Q3 707 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 RIOX1Q9H6W3 641 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SYNPO2LQ9H987 977 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 PIH1D1Q9NWS0 290 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SIDT1Q9NXL6 827 aaKnown RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 VSX1Q9NZR4 365 aaPredicted RBP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 OGDHLQ9ULD0 1010 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SLC45A2Q9UMX9 530 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 CORO2BQ9UQ03 480 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 CDYLQ9Y232 598 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 SNX13Q9Y5W8 968 aa3.03□□□□□ -1.92
PTPRC-208ENST00000427110 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTPRC-208ENST00000427110 MGST3O14880 152 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 PEX14O75381 377 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 SLC43A1O75387 559 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 ERN1O75460 977 aaKnown RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 AGFG2O95081 481 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 FOSP01100 380 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 HRGP04196 525 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 GJB1P08034 283 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 HKR1P10072 659 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 CKBP12277 381 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 MYF5P13349 255 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 PHKG2P15735 406 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 TYRP1P17643 537 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 ADRA1BP35368 520 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 MXRA7P84157 204 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 IFIT5Q13325 482 aaKnown RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 HABP2Q14520 560 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 POLD3Q15054 466 aaPredicted RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 SPDYE7PQ495Y7 208 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 APOA5Q6Q788 366 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 ZNF365Q70YC5 407 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 FAM43AQ8N2R8 423 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 CELF5Q8N6W0 485 aaKnown RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 NSUN7Q8NE18 718 aaKnown RBP3.02□□□□□ -1.93
PTPRC-208ENST00000427110 PARD3BQ8TEW8 1205 aa3.02□□□□□ -1.93
PTPRC-208ENST00000427110 FBXO41Q8TF61 875 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms