RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 NFRKBQ6P4R8 1299 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 SHCBP1Q8NEM2 672 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 TRPM5Q9NZQ8 1165 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 SRGAP2O75044 1071 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 ZMYND10O75800 440 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 ITGB3P05106 788 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 SLC5A5Q92911 643 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 GTSE1Q9NYZ3 720 aa10.65□□□□□ -0.7
SP1-202ENST00000426431 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.65□□□□□ -0.71
SP1-202ENST00000426431 FAM205CA6NFA0 338 aa10.65□□□□□ -0.71
SP1-202ENST00000426431 GEMP55040 296 aa10.65□□□□□ -0.71
SP1-202ENST00000426431 ZNF177Q13360 481 aaPredicted RBP10.65□□□□□ -0.71
SP1-202ENST00000426431 PTPAQ15257 358 aa10.65□□□□□ -0.71
SP1-202ENST00000426431 ZNF668Q96K58 619 aaPredicted RBP10.65□□□□□ -0.71
SP1-202ENST00000426431 WWP1Q9H0M0 922 aa10.65□□□□□ -0.71
SP1-202ENST00000426431 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 PDCD2Q16342 344 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 APBB2Q92870 758 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 AAR2Q9Y312 384 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 A0A0A6YYK5 440 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 RANBP17Q9H2T7 1088 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 PLAGL2Q9UPG8 496 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 UMODL1Q5DID0 1318 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 FOXN1O15353 648 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 B3GAT3O94766 335 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 ANP32DO95626 131 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 ZNF720Q7Z2F6 126 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 FAM9CQ8IZT9 166 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 SPDL1Q96EA4 605 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 SGSM3Q96HU1 749 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 GPRC5DQ9NZD1 345 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 HACD3Q9P035 362 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 UXTQ9UBK9 157 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 HDAC6Q9UBN7 1215 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 UBA6A0AVT1 1052 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 TTC36A6NLP5 189 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 SLC37A4O43826 429 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 OPHN1O60890 802 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
SP1-202ENST00000426431 ZC2HC1CQ53FD0 456 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 LMBRD2Q68DH5 695 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 APOBEC3HQ6NTF7 200 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 VCPIP1Q96JH7 1222 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 DDX47Q9H0S4 455 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 SLC4A7Q9Y6M7 1214 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 F5H5T6 163 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 RNASEH1O60930 286 aaKnown RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 BRAFP15056 766 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 GIT2Q14161 759 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 DCAF6Q58WW2 860 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 ENGASEQ8NFI3 743 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 GOLPH3Q9H4A6 298 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 ARHGEF38Q9NXL2 777 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
SP1-202ENST00000426431 PKP3Q9Y446 797 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 AMHP03971 560 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 EFTUD2Q15029 972 aaKnown RBP eCLIP10.64□□□□□ -0.71
SP1-202ENST00000426431 REPS2Q8NFH8 660 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 CDCA5Q96FF9 252 aa10.64□□□□□ -0.71
SP1-202ENST00000426431 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ERVK-24P63145 666 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 PDAP1Q13442 181 aaKnown RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 ATP6V1G3Q96LB4 118 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 YME1L1Q96TA2 773 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 UBXN6Q9BZV1 441 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ASCC2Q9H1I8 757 aaPredicted RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 STN1Q9H668 368 aaKnown RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 CSPG5O95196 566 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ALDH2P05091 517 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 NCAM1P13591 858 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 NOGQ13253 232 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 LLGL1Q15334 1064 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 SLC27A1Q6PCB7 646 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ADGRF2Q8IZF7 708 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 UROC1Q96N76 676 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 TBCBQ99426 244 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 PPARGC1AQ9UBK2 798 aaKnown RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 HPSEQ9Y251 543 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 MROH7Q68CQ1 1323 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 EXT2Q93063 718 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 RUSC1Q9BVN2 902 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 SEZ6LQ9BYH1 1024 aa10.63□□□□□ -0.71
SP1-202ENST00000426431 PSMC3IPQ9P2W1 217 aaPredicted RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 ZC3H7BQ9UGR2 993 aaKnown RBP10.63□□□□□ -0.71
SP1-202ENST00000426431 SALL3Q9BXA9 1300 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms