RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TNMDQ9H2S6 317 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 CPSF3Q9UKF6 684 aaKnown RBP13.79□□□□□ -0.2
SGCE-203ENST00000425444 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
SGCE-203ENST00000425444 CFAP45Q9UL16 551 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
SGCE-203ENST00000425444 PCDHB13Q9Y5F0 798 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 H7C4K7 107 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 CYP3A5P20815 502 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 ACOT2P49753 483 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 ARPP19P56211 112 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 AMPD3Q01432 767 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 ALCAMQ13740 583 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 RAB33AQ14088 237 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 CD302Q8IX05 232 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 KDF1Q8NAX2 398 aaPredicted RBP13.78□□□□□ -0.2
SGCE-203ENST00000425444 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
SGCE-203ENST00000425444 FRMD3A2A2Y4 597 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 TM4SF5O14894 197 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 HRO43593 1189 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 XYLBO75191 536 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 PPP1R37O75864 691 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 HNRNPA1P09651 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
SGCE-203ENST00000425444 LRPAP1P30533 357 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 ELF1P32519 619 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 CCR3P51677 355 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 GUCY2FP51841 1108 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 LIMK1P53667 647 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 ASIC1P78348 528 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 ROR1Q01973 937 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 DNM1Q05193 864 aaKnown RBP13.77□□□□□ -0.21
SGCE-203ENST00000425444 PDCD11Q14690 1871 aaKnown RBP13.77□□□□□ -0.21
SGCE-203ENST00000425444 TMEM132DQ14C87 1099 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 POSTNQ15063 836 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 E2F4Q16254 413 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 AXDND1Q5T1B0 1012 aaPredicted RBP13.77□□□□□ -0.21
SGCE-203ENST00000425444 SPAG17Q6Q759 2223 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 DSTYKQ6XUX3 929 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 STXBP4Q6ZWJ1 553 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 TMEM130Q8N3G9 435 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 NOC3LQ8WTT2 800 aaKnown RBP13.77□□□□□ -0.21
SGCE-203ENST00000425444 SUSD3Q96L08 255 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 TSPAN18Q96SJ8 248 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 CHRDQ9H2X0 955 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 STYXL1Q9Y6J8 313 aa13.77□□□□□ -0.21
SGCE-203ENST00000425444 PRRG1O14668 218 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 CCL16O15467 120 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 POLR2DO15514 142 aaKnown RBP13.76□□□□□ -0.21
SGCE-203ENST00000425444 KCNK5O95279 499 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 NFICP08651 508 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 HOXA9P31269 272 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 CASP5P51878 434 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
SGCE-203ENST00000425444 KCNA1Q09470 495 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
SGCE-203ENST00000425444 SF3A2Q15428 464 aaKnown RBP13.76□□□□□ -0.21
SGCE-203ENST00000425444 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 MAMSTRQ6ZN01 415 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 USP37Q86T82 979 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 C12orf50Q8NA57 414 aaPredicted RBP13.76□□□□□ -0.21
SGCE-203ENST00000425444 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 MAGEF1Q9HAY2 307 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 PCDHA7Q9UN72 937 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
SGCE-203ENST00000425444 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
SGCE-203ENST00000425444 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 CHURC1-FNTBB4DL54 471 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
SGCE-203ENST00000425444 LRG1P02750 347 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 ADRB2P07550 413 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 CPB1P15086 417 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 FNTBP49356 437 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 SATB1Q01826 763 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 RING1Q06587 406 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 ZBTB6Q15916 424 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 STPG1Q5TH74 334 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 RESP18Q5W5W9 173 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 CEP68Q76N32 757 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 SAAL1Q96ER3 474 aa13.75□□□□□ -0.21
SGCE-203ENST00000425444 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms