RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PSMD6Q15008 389 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MCOLN2Q8IZK6 566 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 CCDC63Q8NA47 563 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 STAMBPL1Q96FJ0 436 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 C12orf42Q96LP6 360 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 RMDN2Q96LZ7 410 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 THAP12O43422 761 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
COL12A1-205ENST00000425443 PECAM1P16284 738 aaPredicted RBP13.74□□□□□ -0.21
COL12A1-205ENST00000425443 GLRA2P23416 452 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 GNA15P30679 374 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 CD151P48509 253 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 WNT7BP56706 349 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ZACNQ401N2 412 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 TRIM42Q8IWZ5 723 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF668Q96K58 619 aaPredicted RBP13.74□□□□□ -0.21
COL12A1-205ENST00000425443 RALAP11233 206 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 NAMPTP43490 491 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 FSTL1Q12841 308 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF280DQ6N043 979 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 P3H4Q92791 437 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 PORCNQ9H237 461 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ADAM22Q9P0K1 906 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ADAMTS5Q9UNA0 930 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
COL12A1-205ENST00000425443 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
COL12A1-205ENST00000425443 MARK3P27448 753 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 CRYMQ14894 314 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 NUGGCQ68CJ6 796 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 FZD9O00144 591 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 PIAS1O75925 651 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 UPP2O95045 317 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 MYBL1P10243 752 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 PSMC4P43686 418 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 STAT5BP51692 787 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 CUL2Q13617 745 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 SLC5A9Q2M3M2 681 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 GALNTL6Q49A17 601 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 TLDC1Q6P9B6 456 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 FITM2Q8N6M3 262 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 SPDL1Q96EA4 605 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 NINJ2Q9NZG7 142 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 KRT10P13645 584 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
COL12A1-205ENST00000425443 THEMIS2Q5TEJ8 643 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 FAM160B1Q5W0V3 765 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
COL12A1-205ENST00000425443 GLIS1Q8NBF1 620 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 DNERQ8NFT8 737 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
COL12A1-205ENST00000425443 MAIP1Q8WWC4 291 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
COL12A1-205ENST00000425443 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 GAS8O95995 478 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 UNGP13051 313 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 ATF2P15336 505 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 ATP4AP20648 1035 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 TRMT10CQ7L0Y3 403 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 WHRNQ9P202 907 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 NEU2Q9Y3R4 380 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 MAFBQ9Y5Q3 323 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 PHIPQ8WWQ0 1821 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 IGF2BP3O00425 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 TTC4O95801 387 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 KRT16P08779 473 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 SLC1A1P43005 524 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 RAB27AP51159 221 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 NCOA4Q13772 614 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
COL12A1-205ENST00000425443 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
COL12A1-205ENST00000425443 ANAPC5Q9UJX4 755 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms