RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PWWP2AQ96N64 755 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 NUDCD1Q96RS6 583 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF518BQ9C0D4 1074 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 GPRC5CQ9NQ84 441 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 DNAJC17Q9NVM6 304 aaKnown RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 SNCAIPQ9Y6H5 919 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 TLR3O15455 904 aaKnown RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 CCDC22O60826 627 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 DGAT1O75907 488 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 CA4P22748 312 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 MMP8P22894 467 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ARSEP51690 589 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF132P52740 706 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 OCRLQ01968 901 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 CDK18Q07002 472 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 PIGHQ14442 188 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 SLC1A5Q15758 541 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 UGCGQ16739 394 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 NLRP9Q7RTR0 991 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 UBR7Q8N806 425 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ACSS3Q9H6R3 686 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 NKX1-2Q9UD57 310 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 HAO1Q9UJM8 370 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 DNPEPQ9ULA0 475 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 POLIQ9UNA4 740 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 WDR81Q562E7 1941 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 FOXO6A8MYZ6 492 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 STBD1O95210 358 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ATP5BP06576 529 aaKnown RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 VPS41P49754 854 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 AP3M2P53677 418 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 RAD23BP54727 409 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 TAZQ16635 292 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 SLFN12LQ6IEE8 588 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 CEP120Q8N960 986 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 MZB1Q8WU39 189 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ZFP69BQ9UJL9 534 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 GRID1Q9ULK0 1009 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF148Q9UQR1 794 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 MTO1Q9Y2Z2 717 aaKnown RBP16.05■□□□□ 0.16
C9orf3-204ENST00000424143 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
C9orf3-204ENST00000424143 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 AHCYL1O43865 530 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 SPAG7O75391 227 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 FESP07332 822 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 DHRS4L1P0CG22 281 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 TARSP26639 723 aaKnown RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 CDH5P33151 784 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 ARL4CP56559 192 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 GPS1Q13098 491 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 ZRSR2Q15696 482 aaKnown RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 TFDP3Q5H9I0 405 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 CIAPIN1Q6FI81 312 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 ANO7Q6IWH7 933 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 IRGCQ6NXR0 463 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 ANO5Q75V66 913 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 CLNKQ7Z7G1 428 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 MICAL1Q8TDZ2 1067 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 LPAR1Q92633 364 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 APBB2Q92870 758 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 GPRASP2Q96D09 838 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 C11orf70Q9BRQ4 267 aa16.04■□□□□ 0.16
C9orf3-204ENST00000424143 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-204ENST00000424143 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 POC1B-GALNT4F8VUJ3 575 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 KLF11O14901 512 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 CCNE2O96020 404 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 GM2AP17900 193 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 GNA15P30679 374 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 GRM1Q13255 1194 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 PGM5Q15124 567 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 LVRNQ6Q4G3 990 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 MFSD7Q6UXD7 560 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 NLRX1Q86UT6 975 aa16.03■□□□□ 0.16
C9orf3-204ENST00000424143 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms