RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 DGAT1O75907 488 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 NPTXRO95502 500 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 KRT1P04264 644 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 TAL1P17542 331 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 GCAP28676 217 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 PIK3CAP42336 1068 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 VPS41P49754 854 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 ARSEP51690 589 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 RAD23BP54727 409 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 JAG1P78504 1218 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 CUL2Q13617 745 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 PIGHQ14442 188 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 KRT72Q14CN4 511 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 RNASEH2BQ5TBB1 312 aaKnown RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 SLFN12LQ6IEE8 588 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 NLRP9Q7RTR0 991 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 LONP2Q86WA8 852 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 TRIM42Q8IWZ5 723 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 PPIL6Q8IXY8 311 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 NIPA2Q8N8Q9 360 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 LPAR1Q92633 364 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 SLITRK1Q96PX8 696 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 OSBPL1AQ9BXW6 950 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 TDRD3Q9H7E2 651 aaKnown RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 DNAJC17Q9NVM6 304 aaKnown RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 MTO1Q9Y2Z2 717 aaKnown RBP11.62□□□□□ -0.55
LIMS1-207ENST00000422797 STYXL1Q9Y6J8 313 aa11.62□□□□□ -0.55
LIMS1-207ENST00000422797 LRRD1A4D1F6 860 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 A8MUI8 341 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 WDR46O15213 610 aaKnown RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 AHCYL1O43865 530 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 NEFHP12036 1026 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 PECAM1P16284 738 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 TARSP26639 723 aaKnown RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 GNA15P30679 374 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 PCK1P35558 622 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 CDK18Q07002 472 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 GPS1Q13098 491 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 CBLBQ13191 982 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 HIF1AQ16665 826 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 KCTD19Q17RG1 926 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 SLC30A10Q6XR72 485 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 SPOCD1Q6ZMY3 1216 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 RBBP8NLQ8NC74 664 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 CPA5Q8WXQ8 436 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 ZNF75CPQ92670 426 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 SLC7A6OSQ96CW6 309 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 GPRASP2Q96D09 838 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 BICD1Q96G01 975 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 C11orf70Q9BRQ4 267 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 HERPUD2Q9BSE4 406 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 DHRS4Q9BTZ2 278 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 HEMGNQ9BXL5 484 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 TRIM55Q9BYV6 548 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 ACSS3Q9H6R3 686 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 ACP6Q9NPH0 428 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 POLIQ9UNA4 740 aa11.61□□□□□ -0.55
LIMS1-207ENST00000422797 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-207ENST00000422797 A8MXQ7 604 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 POC1B-GALNT4F8VUJ3 575 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 HAUS5O94927 633 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 PIGRP01833 764 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 ASNSP08243 561 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 GSTA2P09210 222 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 SKIP12755 728 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 ACO1P21399 889 aaKnown RBP11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CAP2P40123 477 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 VHLP40337 213 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 SSR1P43307 286 aaKnown RBP11.6□□□□□ -0.55
LIMS1-207ENST00000422797 TAS2R40P59535 323 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 OCRLQ01968 901 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 KLC1Q07866 573 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
LIMS1-207ENST00000422797 PKN2Q16513 984 aaKnown RBP11.6□□□□□ -0.55
LIMS1-207ENST00000422797 TFDP3Q5H9I0 405 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 SLC39A4Q6P5W5 647 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CLNKQ7Z7G1 428 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 NLRX1Q86UT6 975 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 ZSWIM2Q8NEG5 633 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CLEC4DQ8WXI8 215 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 DNAJC9Q8WXX5 260 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CDHR1Q96JP9 859 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CGRRF1Q99675 332 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 SH3GL3Q99963 347 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 FRMD8Q9BZ67 464 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-207ENST00000422797 IMPG2Q9BZV3 1241 aa11.6□□□□□ -0.55
LIMS1-207ENST00000422797 TOPORSQ9NS56 1045 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms