RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 PCDHA7Q9UN72 937 aa8.25□□□□□ -1.09
AC012560.1-202ENST00000421324 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
AC012560.1-202ENST00000421324 CDH23Q9H251 3354 aa8.25□□□□□ -1.09
AC012560.1-202ENST00000421324 CASTOR2A6NHX0 329 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 M0R082 166 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ABLIM1O14639 778 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TNFRSF10BO14763 440 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 MBTPS2O43462 519 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TRAPPC3O43617 180 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TBX10O75333 385 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 B3GAT3O94766 335 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 IL9P15248 144 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 GLUD2P49448 558 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 KRT85P78386 507 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 GTF2BQ00403 316 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 POSTNQ15063 836 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 PTPN14Q15678 1187 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ZC2HC1CQ53FD0 456 aaPredicted RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 GLRA4Q5JXX5 417 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 AXDND1Q5T1B0 1012 aaPredicted RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ANKRD54Q6NXT1 300 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 FUT10Q6P4F1 479 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ELMSAN1Q6PJG2 1045 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SHC4Q6S5L8 630 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ALKAL1Q6UXT8 129 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TAS1R1Q7RTX1 841 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SFR1Q86XK3 245 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 CEP57Q86XR8 500 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 CCDC65Q8IXS2 484 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 CEP120Q8N960 986 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 DHX58Q96C10 678 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 DNAJC19Q96DA6 116 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 MSLNLQ96KJ4 702 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SPATA32Q96LK8 384 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 KLHL5Q96PQ7 755 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 HERC2P3Q9BVR0 1158 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 VN1R3Q9BXE9 311 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TNMDQ9H2S6 317 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ST6GALNAC4Q9H4F1 302 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 PLEKHA5Q9HAU0 1116 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 PANK4Q9NVE7 773 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 MARCH5Q9NX47 278 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 TBC1D7Q9P0N9 293 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 PRKAG3Q9UGI9 489 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 DPP7Q9UHL4 492 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 EXOC7Q9UPT5 735 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 KIAA1671Q9BY89 1806 aa8.24□□□□□ -1.09
AC012560.1-202ENST00000421324 A0A087X0B3 334 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 F8W810 466 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 OGTO15294 1046 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 POLR2DO15514 142 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 GCNT3O95395 438 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 GLP2RO95838 553 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PIGRP01833 764 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PROCP04070 461 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CNPP09543 421 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 KCNE1P15382 129 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 NFKB1P19838 968 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RPL9P32969 192 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RBM10P98175 930 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 DSG1Q02413 1049 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CREMQ03060 361 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 ALCAMQ13740 583 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 KCNC3Q14003 757 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 NAB2Q15742 525 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 SMAD2Q15796 467 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 SEZ6Q53EL9 994 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 XKR4Q5GH76 650 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 FAM171A1Q5VUB5 890 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RESP18Q5W5W9 173 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 ADALQ6DHV7 355 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CES5AQ6NT32 575 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PDXDC1Q6P996 788 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 STXBP4Q6ZWJ1 553 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 MAP4K3Q8IVH8 894 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CEP57L1Q8IYX8 460 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 SYCP3Q8IZU3 236 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 GJD3Q8N144 294 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 SMRP1Q8NCR6 262 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 VN1R2Q8NFZ6 395 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RIN2Q8WYP3 895 aaPredicted RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 STAMQ92783 540 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 HVCN1Q96D96 273 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms