RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MLLT6P55198 1093 aaPredicted RBP18.77■□□□□ 0.6
MSH6-203ENST00000420813 FOXK2Q01167 660 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 SMARCB1Q12824 385 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 DNAJB7Q7Z6W7 309 aaPredicted RBP18.77■□□□□ 0.6
MSH6-203ENST00000420813 ITIH5Q86UX2 942 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 METTL23Q86XA0 190 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 ZNF687Q8N1G0 1237 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
MSH6-203ENST00000420813 INTS4Q96HW7 963 aaKnown RBP18.77■□□□□ 0.6
MSH6-203ENST00000420813 TMEM209Q96SK2 561 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 ZCWPW1Q9H0M4 648 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 OLFML3Q9NRN5 406 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 PCDHGA2Q9Y5H1 932 aa18.77■□□□□ 0.6
MSH6-203ENST00000420813 DCHS1Q96JQ0 3298 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 NCANO14594 1321 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 KIF26AQ9ULI4 1882 aaPredicted RBP18.76■□□□□ 0.59
MSH6-203ENST00000420813 ARNTLO00327 626 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 CYB561D2O14569 222 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 CSTF1Q05048 431 aaKnown RBP18.76■□□□□ 0.59
MSH6-203ENST00000420813 ALCAMQ13740 583 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
MSH6-203ENST00000420813 C1orf228Q6PIY5 440 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 MAMSTRQ6ZN01 415 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 EFCAB13Q8IY85 973 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 THEM5Q8N1Q8 247 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 TTC9BQ8N6N2 239 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 RUBCNQ92622 972 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 NELL1Q92832 810 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 MSANTD3Q96H12 275 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 CLIC6Q96NY7 704 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 ACCSQ96QU6 501 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 PYM1Q9BRP8 204 aaKnown RBP18.76■□□□□ 0.59
MSH6-203ENST00000420813 CHRDQ9H2X0 955 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 PRMT8Q9NR22 394 aaPredicted RBP18.76■□□□□ 0.59
MSH6-203ENST00000420813 PIAS3Q9Y6X2 628 aa18.76■□□□□ 0.59
MSH6-203ENST00000420813 DMXL1Q9Y485 3027 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 GPR179Q6PRD1 2367 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 CHADO15335 359 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 PNPLA4P41247 253 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 FCHO2Q0JRZ9 810 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 VEPH1Q14D04 833 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 SV2CQ496J9 727 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 SLC39A12Q504Y0 691 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 FAM173BQ6P4H8 233 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 GAREM2Q75VX8 874 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 SUMF1Q8NBK3 374 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 FAM3CQ92520 227 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 ZNF560Q96MR9 790 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 FAM126AQ9BYI3 521 aaPredicted RBP18.75■□□□□ 0.59
MSH6-203ENST00000420813 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 ZSCAN32Q9NX65 697 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 NDRG2Q9UN36 371 aaKnown RBP18.75■□□□□ 0.59
MSH6-203ENST00000420813 PCDHB13Q9Y5F0 798 aa18.75■□□□□ 0.59
MSH6-203ENST00000420813 FRMD3A2A2Y4 597 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 KPNA7A9QM74 516 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 GCNT3O95395 438 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 LDHAP00338 332 aaKnown RBP18.74■□□□□ 0.59
MSH6-203ENST00000420813 GARTP22102 1010 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 GABRR2P28476 465 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 WEE1P30291 646 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 STAT6P42226 847 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 ID4P47928 161 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 CEBPZQ03701 1054 aaKnown RBP18.74■□□□□ 0.59
MSH6-203ENST00000420813 KCNA1Q09470 495 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 SLC39A14Q15043 492 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 ARHGAP15Q53QZ3 475 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 ARID3BQ8IVW6 561 aaPredicted RBP18.74■□□□□ 0.59
MSH6-203ENST00000420813 BRSK2Q8IWQ3 736 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 YAF2Q8IY57 180 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 RSPRY1Q96DX4 576 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 USP28Q96RU2 1077 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 SEPT5Q99719 369 aaPredicted RBP18.74■□□□□ 0.59
MSH6-203ENST00000420813 MKNK1Q9BUB5 465 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 ZSCAN16Q9H4T2 348 aaPredicted RBP18.74■□□□□ 0.59
MSH6-203ENST00000420813 OBP2AQ9NY56 170 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 MTMR6Q9Y217 621 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 CACNA1AO00555 2505 aa18.74■□□□□ 0.59
MSH6-203ENST00000420813 CEP250Q9BV73 2442 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 LILRB5O75023 590 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 SOAT2O75908 522 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 ATF6P18850 670 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 CDC25CP30307 473 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 MTAPQ13126 283 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 MGAT5BQ3V5L5 792 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 STXBP5Q5T5C0 1151 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 WSCD1Q658N2 575 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 ERMP1Q7Z2K6 904 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 CSGALNACT1Q8TDX6 532 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 ATRIPQ8WXE1 791 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 FAM213AQ9BRX8 229 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 TBC1D7Q9P0N9 293 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 ZMYM5Q9UJ78 669 aa18.73■□□□□ 0.59
MSH6-203ENST00000420813 IDEP14735 1019 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 CASP5P51878 434 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 ARHGAP29Q52LW3 1261 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms