RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 MRGPRX4Q96LA9 322 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 MED15Q96RN5 788 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 PNKPQ96T60 521 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 MYOCQ99972 504 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 GSTO2Q9H4Y5 243 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 WDCPQ9H6R7 721 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 NMRK2Q9NPI5 230 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 FBXO34Q9NWN3 711 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 SIDT1Q9NXL6 827 aaKnown RBP4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 ZNF70Q9UC06 446 aaPredicted RBP4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 PCDHB1Q9Y5F3 818 aa4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 CENPJQ9HC77 1338 aaPredicted RBP4.18□□□□□ -1.74
SDCBPP3-201ENST00000419629 A0A0U1RQG5 324 aaPredicted RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 CCDC151A5D8V7 595 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 AKAP10O43572 662 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 FTLP02792 175 aaPredicted RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 WT1P19544 449 aaPredicted RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 MALP21145 153 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 FOLR3P41439 243 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 RAB27AP51159 221 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 GEN1Q17RS7 908 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 KHDC1Q4VXA5 237 aaKnown RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 TSTD2Q5T7W7 516 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 SLC4A10Q6U841 1118 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 PRR18Q8N4B5 295 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 TBC1D15Q8TC07 691 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 SSH3Q8TE77 659 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 MVB12AQ96EY5 273 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 MARS2Q96GW9 593 aaKnown RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 AIFM3Q96NN9 605 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 SIK2Q9H0K1 926 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 CDH19Q9H159 772 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 CFAP97Q9P2B7 532 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 HSFX1Q9UBD0 423 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 FEZ2Q9UHY8 353 aaPredicted RBP4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 NEU2Q9Y3R4 380 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 ENTPD2Q9Y5L3 495 aa4.17□□□□□ -1.74
SDCBPP3-201ENST00000419629 KAT6AQ92794 2004 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CDHR4A6H8M9 788 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 YY2O15391 372 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 SLC43A1O75387 559 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 RFPL1O75677 317 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CELA2AP08217 269 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 FXR1P51114 621 aaKnown RBP eCLIP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 ZNF280AP59817 542 aaPredicted RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 DSC2Q02487 901 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CALD1Q05682 793 aaKnown RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 PIGFQ07326 219 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 ZNF844Q08AG5 666 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 NOGQ13253 232 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 GTF2H3Q13889 308 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 PPP2R5AQ15172 486 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 KAZNQ674X7 775 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CXorf57Q6NSI4 855 aaKnown RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 ZNF365Q70YC5 407 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CATIPQ7Z7H3 387 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 GRAMD1CQ8IYS0 662 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 Q8NA96 180 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 JDP2Q8WYK2 163 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 HPS3Q969F9 1004 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 SARAFQ96BY9 339 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 C1GALT1C1Q96EU7 318 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 FBXL20Q96IG2 436 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 CDK5RAP3Q96JB5 506 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 VRK1Q99986 396 aaPredicted RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 RHOBTB2Q9BYZ6 727 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 METTL14Q9HCE5 456 aaKnown RBP4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 LMBRD1Q9NUN5 540 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 RLIMQ9NVW2 624 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 ZIM2Q9NZV7 527 aa4.16□□□□□ -1.74
SDCBPP3-201ENST00000419629 MANSC4A6NHS7 340 aaPredicted RBP4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 HK3P52790 923 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 SF3B3Q15393 1217 aaKnown RBP4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 FAM153CQ494X1 144 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 PREPLQ4J6C6 727 aaPredicted RBP4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 FLYWCH1Q4VC44 716 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 VWA1Q6PCB0 445 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 HEATR3Q7Z4Q2 680 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 PDSS2Q86YH6 399 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 CHPFQ8IZ52 775 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 CAMKK1Q8N5S9 505 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 DCBLD1Q8N8Z6 715 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 HASPINQ8TF76 798 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 DDB2Q92466 427 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 BRD9Q9H8M2 597 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 CNNM1Q9NRU3 951 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 WNT6Q9Y6F9 365 aa4.15□□□□□ -1.75
SDCBPP3-201ENST00000419629 AP1G1O43747 822 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 MARCH6O60337 910 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 AGFG2O95081 481 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 BMP15O95972 392 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 CHEK2O96017 543 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 GNAI2P04899 355 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 ELFN1P0C7U0 828 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 PIK3CGP48736 1102 aa4.14□□□□□ -1.75
SDCBPP3-201ENST00000419629 NOMO3P69849 1222 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms