RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CCNG2Q16589 344 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 ECHDC2Q86YB7 292 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 MAIP1Q8WWC4 291 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
LIMK1-202ENST00000418310 H0Y3Z8 333 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 DIAPH2O60879 1101 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 STBD1O95210 358 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 TAC1P20366 129 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 CETN2P41208 172 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 BPIFB4P59827 614 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 SMAD1Q15797 465 aaKnown RBP12.56□□□□□ -0.4
LIMK1-202ENST00000418310 TNFAIP8L3Q5GJ75 292 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF302Q9NR11 478 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 HAO1Q9UJM8 370 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 BRWD3Q6RI45 1802 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 LIASO43766 372 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 NEFHP12036 1026 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 GDF10P55107 478 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF252P-AS1Q0IIN9 211 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 PSMD6Q15008 389 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 TEPSINQ96N21 525 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 TIPINQ9BVW5 301 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 FAM47DPA6NHR8 397 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 CD48P09326 243 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ELF1P32519 619 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 CDH8P55286 799 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 IL9RQ01113 521 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 SLC1A5Q15758 541 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ANKRD22Q5VYY1 191 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ENOSF1Q7L5Y1 443 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ERICH1Q86X53 443 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 ANKRD35Q8N283 1001 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 TRIM11Q96F44 468 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 PARVAQ9NVD7 372 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
LIMK1-202ENST00000418310 CBX6O95503 412 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 ANP32DO95626 131 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 MAN1A1P33908 653 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 GCLCP48506 637 aaPredicted RBP12.55□□□□□ -0.4
LIMK1-202ENST00000418310 TFDP1Q14186 410 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 TAF5Q15542 800 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 SEPT7Q16181 437 aaKnown RBP12.55□□□□□ -0.4
LIMK1-202ENST00000418310 ZNF568Q3ZCX4 644 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 RHPN2Q8IUC4 686 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CCDC33Q8N5R6 958 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 HSPH1Q92598 858 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 P3H4Q92791 437 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
LIMK1-202ENST00000418310 MYLK2Q9H1R3 596 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 PHTF1Q9UMS5 762 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 POLIQ9UNA4 740 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 UPP2O95045 317 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 MYBL1P10243 752 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 YY1P25490 414 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
LIMK1-202ENST00000418310 TRPC3Q13507 836 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 XKR3Q5GH77 459 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 HHATQ5VTY9 493 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 SPOCD1Q6ZMY3 1216 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 C15orf39Q6ZRI6 1047 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 TFAP2BQ92481 460 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 STK32BQ9NY57 414 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 MCM8Q9UJA3 840 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CENPFP49454 3210 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 PSTPIP1O43586 416 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 PSMA2P25787 234 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 KLRC2P26717 231 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
LIMK1-202ENST00000418310 ABHD15Q6UXT9 468 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 JOSD2Q8TAC2 188 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 NPHS2Q9NP85 383 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 CYP39A1Q9NYL5 469 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
LIMK1-202ENST00000418310 DNALI1O14645 258 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-202ENST00000418310 PMM2O15305 246 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 GRAP2O75791 330 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
LIMK1-202ENST00000418310 KRT4P19013 534 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms