RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 DPEP1P16444 411 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 MTFR1Q15390 333 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 CNGA3Q16281 694 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 JADE3Q92613 823 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 PKD2L2Q9NZM6 624 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 HEATR9A2RTY3 570 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 CHUKO15111 745 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 H2AFYO75367 372 aaKnown RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 POLBP06746 335 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 KDSRQ06136 332 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 SYDE1Q6ZW31 735 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 ZNF438Q7Z4V0 828 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 FAM151AQ8WW52 585 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 USP13Q92995 863 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 ENTPD3O75355 529 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 APOA4P06727 396 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 PRMT1Q99873 361 aaKnown RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
PTCH1-205ENST00000418258 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
PTCH1-205ENST00000418258 TRIM16O95361 564 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 DYRK3O43781 588 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 CKMP06732 381 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 PGK2P07205 417 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 PNPLA4P41247 253 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 NPEPPSP55786 919 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 PLCL1Q15111 1095 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 PI4K2AQ9BTU6 479 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 C2orf81A6NN90 581 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-205ENST00000418258 NUMBP49757 651 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 CARNMT1Q8N4J0 409 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 OPTNQ96CV9 577 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 CDYLQ9Y232 598 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.54
PTCH1-205ENST00000418258 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CYTH3O43739 400 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 KRT16P08779 473 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 ERVK-10P10266 1014 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TAF6P49848 677 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF200P98182 395 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TADA1Q96BN2 335 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PCMTD2Q9NV79 361 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PNMA8BQ9ULN7 279 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 UBE2Q2LH0YL09 131 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 URODP06132 367 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 ENO3P13929 434 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 GPD1P21695 349 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 HSPA9P38646 679 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 HIC1Q14526 733 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 MRPS31Q92665 395 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 F5H5T6 163 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 RHOBTB1O94844 696 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 GTF2H1P32780 548 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 USE1Q9NZ43 259 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 FHOD1Q9Y613 1164 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 ALDH6A1Q02252 535 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 BTKQ06187 659 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 SEMA3FQ13275 785 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PTK6Q13882 451 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PHACTR4Q8IZ21 702 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 DNAJB2P25686 324 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 STAT4Q14765 748 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CKBP12277 381 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 EPHX2P34913 555 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PLA2G4AP47712 749 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms