RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.531e-10■■■■■ 255.2
TRAPPC12-205ENST00000416918 SIX4Q9UIU6 781 aa11.72□□□□□ -0.53
TRAPPC12-205ENST00000416918 MCM3APO60318 1980 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 GAS8O95995 478 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ITGB3P05106 788 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 GJB1P08034 283 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 NFICP08651 508 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 KRT7P08729 469 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 KCNE1P15382 129 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 HOXA11P31270 313 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 HSPA9P38646 679 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 GABRB2P47870 512 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 EIF3BP55884 814 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 OSTNP61366 133 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 SLC7A5Q01650 507 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ZBTB6Q15916 424 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 HADHQ16836 314 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 SGO2Q562F6 1265 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ODF2Q5BJF6 829 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 XKR4Q5GH76 650 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 DCAF12L1Q5VU92 463 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 MMS22LQ6ZRQ5 1243 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ZDHHC17Q8IUH5 632 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 CXorf38Q8TB03 319 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 IPO4Q8TEX9 1081 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 IFT81Q8WYA0 676 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 C18orf8Q96DM3 657 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 SNX27Q96L92 541 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ZNF560Q96MR9 790 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 C11orf70Q9BRQ4 267 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 NT5C1AQ9BXI3 368 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 AP1M1Q9BXS5 423 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 UPF3AQ9H1J1 476 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 ACP6Q9NPH0 428 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 AGAP1Q9UPQ3 857 aa11.71□□□□□ -0.53
TRAPPC12-205ENST00000416918 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 MYL3P08590 195 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 PYGMP11217 842 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CD19P15391 556 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CD58P19256 250 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CYP2B6P20813 491 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 HOXD10P28358 340 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 RDXP35241 583 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 SCNN1AP37088 669 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 RAD23BP54727 409 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■■■□□ 15.5
TRAPPC12-205ENST00000416918 TERF2Q15554 542 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CCNG2Q16589 344 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 DUPD1Q68J44 220 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 DRICH1Q6PGQ1 229 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 LCLAT1Q6UWP7 414 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 SESTD1Q86VW0 696 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 SMC1BQ8NDV3 1235 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 DDX47Q9H0S4 455 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 SMARCAL1Q9NZC9 954 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 AMACRQ9UHK6 382 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 NFU1Q9UMS0 254 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
TRAPPC12-205ENST00000416918 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 TCRBV5S1A1TA0A578 114 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 GOLGA6L10A6NI86 522 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 ZMYND10O75800 440 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 CABYRO75952 493 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 TJP3O95049 919 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 NPTXRO95502 500 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 ECEL1O95672 775 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 GNRH1P01148 92 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 ITIH2P19823 946 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 CYP2C19P33261 490 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 PURAQ00577 322 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 NOGQ13253 232 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 SLMAPQ14BN4 828 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms