RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ADAMTSL4Q6UY14 1074 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CATSPERGQ6ZRH7 1159 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM83HQ6ZRV2 1179 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 IKBIPQ70UQ0 350 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 C16orf59Q7L2K0 433 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ARMC9Q7Z3E5 817 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CACNA2D4Q7Z3S7 1137 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TMC6Q7Z403 805 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PXKQ7Z7A4 578 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CTAGE6Q86UF2 777 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RTN4RL1Q86UN2 441 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PDZD3Q86UT5 571 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 VSIG10LQ86VR7 867 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM200AQ86VY9 491 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CTAGE4Q8IX94 777 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PPIL6Q8IXY8 311 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PEX5LQ8IYB4 626 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ANKRD35Q8N283 1001 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 AGGF1Q8N302 714 aaeCLIP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 OXR1Q8N573 874 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM71DQ8N9W8 422 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 MFSD2AQ8NA29 543 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SPERTQ8NA61 448 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KLHL23Q8NBE8 558 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC150Q8NCX0 1101 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 EHBP1Q8NDI1 1231 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TNIP2Q8NFZ5 429 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 OR56B2PQ8NGI1 322 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 OR6Y1Q8NGX8 325 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 IL31RAQ8NI17 732 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 STK35Q8TDR2 534 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BRF1Q92994 677 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 HDAC10Q969S8 669 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RILPL2Q969X0 211 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 VPS33AQ96AX1 596 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RMDN1Q96DB5 314 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 C18orf8Q96DM3 657 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SGF29Q96ES7 293 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF764Q96H86 408 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 C1orf159Q96HA4 380 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM167AQ96KS9 214 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CNOT6LQ96LI5 555 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ZPBPQ9BS86 351 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 APOL6Q9BWW8 343 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 USP26Q9BXU7 913 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ITPAQ9BY32 194 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CD244Q9BZW8 370 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 NYXQ9GZU5 481 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BRD8Q9H0E9 1235 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 WNT8AQ9H1J5 351 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 MRPL46Q9H2W6 279 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SMARCAD1Q9H4L7 1026 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TAF1DQ9H5J8 278 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BRD7Q9NPI1 651 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ARHGEF3Q9NR81 526 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SIRT3Q9NTG7 399 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CATSPERZQ9NTU4 200 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 DDX18Q9NVP1 670 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ANO10Q9NW15 660 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 HCFC1R1Q9NWW0 138 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PPP1R14DQ9NXH3 145 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 MRPL15Q9P015 296 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 NDUFAF4Q9P032 175 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 AFF4Q9UHB7 1163 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ATXN7L1Q9ULK2 861 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF112Q9ULX5 631 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ADAMTS8Q9UP79 889 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SMG5Q9UPR3 1016 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF451Q9Y4E5 1061 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BACE2Q9Y5Z0 518 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CFAP20Q9Y6A4 193 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM169AQ9Y6X4 670 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 MROH5Q6ZUA9 1318 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.36□□□□□ -1.874e-6■■■■□ 19.5
CTDSPL-203ENST00000416688 SLC12A8A0AV02 714 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC154A6NI56 674 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 AQP12BA6NM10 295 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM47E-STBD1D6RA91 191 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF223E7ERA6 249 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MYO1FO00160 1098 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NFKBIEO00221 500 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 EBAG9O00559 213 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 WNT7AO00755 349 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CETN3O15182 167 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MAGEB3O15480 346 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 PROM1O43490 865 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 TLL1O43897 1013 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 NMT2O60551 498 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 OLFM2O95897 454 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 LRG1P02750 347 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 A1BGP04217 495 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ITGB1P05556 798 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ANXA2P07355 339 aaKnown RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 MYL4P12829 197 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 XRCC6P12956 609 aaKnown RBP eCLIP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 HOXD8P13378 290 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT5P13647 590 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 ACPPP15309 386 aa3.35□□□□□ -1.87
CTDSPL-203ENST00000416688 CSF2RAP15509 400 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms