RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 GNL1P36915 607 aaPredicted RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 BRCC3P46736 316 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 LHX1P48742 406 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 NDST1P52848 882 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 CDH8P55286 799 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 CCZ1BP86790 482 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 CCZ1P86791 482 aaPredicted RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 INCA1Q0VD86 236 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 SPA17Q15506 151 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 MEA1Q16626 185 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 SOWAHAQ2M3V2 549 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 TIGD5Q53EQ6 642 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 ZNF394Q53GI3 561 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 FUT10Q6P4F1 479 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 ZNF677Q86XU0 584 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 CCDC170Q8IYT3 715 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 TXLNBQ8N3L3 684 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 PDCL2Q8N4E4 241 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 C3orf58Q8NDZ4 430 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 TMEM169Q96HH4 297 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 TNIP3Q96KP6 325 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 ZNF830Q96NB3 372 aaPredicted RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 RAD9AQ99638 391 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 MRPL45Q9BRJ2 306 aaKnown RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 SDCBP2Q9H190 292 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 HAUS4Q9H6D7 363 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 NHEJ1Q9H9Q4 299 aaPredicted RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 L1RE1Q9UN81 338 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 RWDD3Q9Y3V2 267 aa8.96□□□□□ -0.98
RBM39-208ENST00000416108 MRPL42Q9Y6G3 142 aaKnown RBP8.96□□□□□ -0.98
RBM39-208ENST00000416108 SOWAHDA6NJG2 315 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 NT5C1B-RDH14C9J2C7 533 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 I3L4J1 428 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 M0QZQ0 153 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CCP110O43303 1012 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 B4GALT3O60512 393 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CILPO75339 1184 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 VDRP11473 427 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CYP11B1P15538 503 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 FECHP22830 423 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 PCSK1P29120 753 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CLCN1P35523 988 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 EIF4A3P38919 411 aaKnown RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.984e-6■□□□□ 9.4
RBM39-208ENST00000416108 KIF11P52732 1056 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 HTRA4P83105 476 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 TSPY1Q01534 308 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 YWHAHQ04917 246 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 BMS1Q14692 1282 aaKnown RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 STILQ15468 1287 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 SGO2Q562F6 1265 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 FAM171A1Q5VUB5 890 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 TAF3Q5VWG9 929 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 WSCD1Q658N2 575 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 E4F1Q66K89 784 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 OVOS1Q6IE37 1185 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 ZNF280DQ6N043 979 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 KIAA1841Q6NSI8 718 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 PPP1R2P3Q6NXS1 205 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 WDR59Q6PJI9 974 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 KCNT2Q6UVM3 1135 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 TRIM72Q6ZMU5 477 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 IRF2BP2Q7Z5L9 587 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 SLC47A2Q86VL8 602 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CEP57Q86XR8 500 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 UBR7Q8N806 425 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 COLGALT1Q8NBJ5 622 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 TMEM176AQ96HP8 235 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 HEXIM2Q96MH2 286 aaKnown RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 CHP1Q99653 195 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 AGPAT1Q99943 283 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CWH43Q9H720 699 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 RC3H2Q9HBD1 1191 aaKnown RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 MARCH5Q9NX47 278 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 DDX43Q9NXZ2 648 aaKnown RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 CXXC1Q9P0U4 656 aaPredicted RBP8.95□□□□□ -0.98
RBM39-208ENST00000416108 ARHGAP20Q9P2F6 1191 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 KIAA1257Q9ULG3 409 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 CNTN6Q9UQ52 1028 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.95□□□□□ -0.98
RBM39-208ENST00000416108 ATP8B3O60423 1300 aa8.95□□□□□ -0.98
RBM39-208ENST00000416108 PATJQ8NI35 1801 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 MTCL1Q9Y4B5 1905 aaKnown RBP8.94□□□□□ -0.98
RBM39-208ENST00000416108 H7C4K7 107 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 CYP11A1P05108 521 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 ITGB1P05556 798 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 PLEKP08567 350 aaPredicted RBP8.94□□□□□ -0.98
RBM39-208ENST00000416108 PDGFRBP09619 1106 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 BRD2P25440 801 aaKnown RBP8.94□□□□□ -0.98
RBM39-208ENST00000416108 MSNP26038 577 aaKnown RBP8.94□□□□□ -0.98
RBM39-208ENST00000416108 ZNF132P52740 706 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 RAD23BP54727 409 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 KRT83P78385 493 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 CDR2Q01850 454 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 KRT17Q04695 432 aa8.94□□□□□ -0.98
RBM39-208ENST00000416108 ORC1Q13415 861 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms