RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 A8MUI8 341 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 KCNN4O15554 427 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ADCY3O60266 1144 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ARP10275 920 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 PYGBP11216 843 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SPP2Q13103 211 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 DCPSQ96C86 337 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ASCC2Q9H1I8 757 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SUGT1Q9Y2Z0 365 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ADORA2BP29275 332 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SERPINB12Q96P63 405 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ZCWPW1Q9H0M4 648 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ZC4H2Q9NQZ6 224 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 PSMC3IPQ9P2W1 217 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 TYW5A2RUC4 315 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ENTPD5O75356 428 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SERPINB3P29508 390 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 THEMIS2Q5TEJ8 643 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 NDUFAF2Q8N183 169 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 OSBPL7Q9BZF2 842 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 UNC45AQ9H3U1 944 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 PJA2O43164 708 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ASNSP08243 561 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SSTR1P30872 391 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 RBBP8NLQ8NC74 664 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SCG3Q8WXD2 468 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 SH3GL2Q99962 352 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 MMTAG2Q9BU76 263 aaKnown RBP13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ADNPQ9H2P0 1102 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 ZNF229Q9UJW7 825 aa13.51□□□□□ -0.25
SCN1B-202ENST00000415950 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 SNX2O60749 519 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 FUT2Q10981 343 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 PRPF39Q86UA1 669 aaKnown RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 RFWD2Q8NHY2 731 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 PAPOLBQ9NRJ5 636 aaKnown RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 PARVAQ9NVD7 372 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 ZC3H7BQ9UGR2 993 aaKnown RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 SMG5Q9UPR3 1016 aaKnown RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 TRIM49D1C9J1S8 452 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 HLA-DRAP01903 254 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 HOXA7P31268 230 aaPredicted RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 C11orf63Q6NUN7 778 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 GPD1LQ8N335 351 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 SPATA18Q8TC71 538 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 ACER1Q8TDN7 264 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 EME1Q96AY2 570 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 SPON2Q9BUD6 331 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 CYP11B1P15538 503 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 NLRP11P59045 1033 aaKnown RBP13.5□□□□□ -0.25
SCN1B-202ENST00000415950 UBE3AQ05086 875 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 FLOT2Q14254 428 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 ALG3Q92685 438 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 GTF3C4Q9UKN8 822 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
SCN1B-202ENST00000415950 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 XPO1O14980 1071 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 RPS6P62753 249 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 STX3Q13277 289 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 ITIH4Q14624 930 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 LAYNQ6UX15 382 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 FRA10AC1Q70Z53 315 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 PSPC1Q8WXF1 523 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 PGBD4Q96DM1 585 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 DDX50Q9BQ39 737 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 TARS2Q9BW92 718 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 EML1O00423 815 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 SNX3O60493 162 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 MYL2P10916 166 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 MRPS35P82673 323 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 CHI3L2Q15782 390 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 PKN2Q16513 984 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 ECM1Q16610 540 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 ANO4Q32M45 955 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 C6orf10Q5SRN2 563 aa13.49□□□□□ -0.25
SCN1B-202ENST00000415950 SNRNP48Q6IEG0 339 aaKnown RBP13.49□□□□□ -0.25
SCN1B-202ENST00000415950 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms