RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 RALGPS2Q86X27 583 aaPredicted RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 MYCT1Q8N699 235 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 FAM200AQ8TCP9 573 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SPIRE2Q8WWL2 714 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 RXFP3Q9NSD7 469 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 ANKFY1Q9P2R3 1169 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 ANGPTL2Q9UKU9 493 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SRPRBQ9Y5M8 271 aaKnown RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 ACACBO00763 2458 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 RALGAPA1Q6GYQ0 2036 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 M0QZQ0 153 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 AXIN1O15169 862 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 PLCG1P19174 1290 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 PMLP29590 882 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 PLD1Q13393 1074 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 CCINQ13939 588 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 STK38Q15208 465 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 N4BP2L1Q5TBK1 243 aaPredicted RBP14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 GAREM2Q75VX8 874 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 TTC9BQ8N6N2 239 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 BICD1Q96G01 975 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 ARRDC1-AS1Q9H2J1 176 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 SLC27A5Q9Y2P5 690 aa14.36□□□□□ -0.11
CTHRC1-202ENST00000415886 NPHP3-ACAD11A0A0J9YXS1 232 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 DPYSL4O14531 572 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 EXTL3O43909 919 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 FOXD2O60548 495 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 SOAT2O75908 522 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 OAZ2O95190 189 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 CXCL8P10145 99 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 ALDH1A3P47895 512 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 PXNP49023 591 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 LIMK1P53667 647 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 EPHB3P54753 998 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 TNK2Q07912 1038 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 SLC39A14Q15043 492 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 ARHGAP29Q52LW3 1261 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 FOXD4L5Q5VV16 416 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 PKN3Q6P5Z2 889 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 KRI1Q8N9T8 703 aaKnown RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 FOXD4L4Q8WXT5 416 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 RAD54LQ92698 747 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 ATXN3LQ9H3M9 355 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 RALYQ9UKM9 306 aaKnown RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 ODF2LQ9ULJ1 636 aa14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-202ENST00000415886 KIF26AQ9ULI4 1882 aaPredicted RBP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 MTMR11A4FU01 709 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 TM4SF5O14894 197 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 TOM1L1O75674 476 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 PRAMEF12O95522 483 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 SCP2P22307 547 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GABRR2P28476 465 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 LRPAP1P30533 357 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 HOXA6P31267 233 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 ABCD1P33897 745 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GUCY2FP51841 1108 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GRIN1Q05586 938 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GPR17Q13304 367 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 MCM6Q14566 821 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 PTPAQ15257 358 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GPR158Q5T848 1215 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 CENPPQ6IPU0 288 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 SV2BQ7L1I2 683 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 DNAJB7Q7Z6W7 309 aaPredicted RBP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 USP37Q86T82 979 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 KBTBD6Q86V97 674 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 ATAD1Q8NBU5 361 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 PSMG2Q969U7 264 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 KIF12Q96FN5 646 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 USP28Q96RU2 1077 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 TMEM209Q96SK2 561 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 PANK2Q9BZ23 570 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 SMOC1Q9H4F8 434 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 PARVGQ9HBI0 331 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 FBXO2Q9UK22 296 aaPredicted RBP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 GREB1Q4ZG55 1949 aa14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 MAP1BP46821 2468 aaKnown RBP14.34□□□□□ -0.11
CTHRC1-202ENST00000415886 OR6C75A6NL08 312 aa14.33□□□□□ -0.12
CTHRC1-202ENST00000415886 CLDN3O15551 220 aa14.33□□□□□ -0.12
CTHRC1-202ENST00000415886 TRAK2O60296 914 aa14.33□□□□□ -0.12
CTHRC1-202ENST00000415886 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
CTHRC1-202ENST00000415886 EPN2O95208 641 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms