RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 COL4A1P02462 1669 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 CLRN2A0PK11 232 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 H3BML4 177 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 ANP32CO43423 234 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 UBXN7O94888 489 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 SGPL1O95470 568 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 TFRCP02786 760 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 CHKAP35790 457 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PSMC4P43686 418 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 MTNR1BP49286 362 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 CCT4P50991 539 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 GEMIN4P57678 1058 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 UBXN2AP68543 259 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PFKPQ01813 784 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 ALDH6A1Q02252 535 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 BTKQ06187 659 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PUM3Q15397 648 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 L1TD1Q5T7N2 865 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 RNF220Q5VTB9 566 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 LVRNQ6Q4G3 990 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 TMC5Q6UXY8 1006 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 LDHAL6AQ6ZMR3 332 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 USP45Q70EL2 814 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PROSER1Q86XN7 944 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PPM1NQ8N819 430 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 DTX3Q8N9I9 347 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 WDR48Q8TAF3 677 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 CALML6Q8TD86 181 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 U2AF1L4Q8WU68 220 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 ERCC4Q92889 916 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 PRMT6Q96LA8 375 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 RIPOR3Q96MK2 946 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 GDF15Q99988 308 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 WDR12Q9GZL7 423 aaKnown RBP7.07□□□□□ -1.28
EPHA4-204ENST00000415749 ARFGAP3Q9NP61 516 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 BABAM1Q9NWV8 329 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 EDARQ9UNE0 448 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 BRCA2P51587 3418 aa7.07□□□□□ -1.28
EPHA4-204ENST00000415749 UBA6A0AVT1 1052 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-204ENST00000415749 RASA4BC9J798 803 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 BTBD19C9JJ37 291 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 GOLGA6L22H0YM25 854 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 RFXAPO00287 272 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 GOLIM4O00461 696 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 RASA4O43374 803 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 B3GALT2O43825 422 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 ENPP1P22413 925 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 ITGA1P56199 1179 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 LRIT3Q3SXY7 679 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 CT83Q5H943 113 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 TIGD7Q6NT04 549 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-204ENST00000415749 ESRP1Q6NXG1 681 aaKnown RBP7.06□□□□□ -1.28
EPHA4-204ENST00000415749 C17orf99Q6UX52 265 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 LIPIQ6XZB0 460 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PHYKPLQ8IUZ5 450 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 KIAA0319LQ8IZA0 1049 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PDILTQ8N807 584 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 KYQ8NBH2 561 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PPHLN1Q8NEY8 458 aaKnown RBP7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PLEKHF1Q96S99 279 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 C11orf84Q9BUA3 381 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-204ENST00000415749 B3GNT5Q9BYG0 378 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 VEZTQ9HBM0 779 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 SLC39A2Q9NP94 309 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 INCENPQ9NQS7 918 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 MSRAQ9UJ68 235 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 TUBD1Q9UJT1 453 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PCDHAC2Q9Y5I4 1007 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PMF1-BGLAPU3KQ54 211 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 MED23Q9ULK4 1368 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 PSME4Q14997 1843 aa7.06□□□□□ -1.28
EPHA4-204ENST00000415749 COL1A1P02452 1464 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-204ENST00000415749 hCG_1642624A0A1W2PR95 340 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 ZNF500O60304 480 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-204ENST00000415749 AGR2O95994 175 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 PCCAP05165 728 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-204ENST00000415749 CETPP11597 493 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 CAPN2P17655 700 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 PEX2P28328 305 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 CTGFP29279 349 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 CASP2P42575 452 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 LIMS1P48059 325 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 RBM5P52756 815 aaKnown RBP eCLIP7.05□□□□□ -1.28
EPHA4-204ENST00000415749 ROM1Q03395 351 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 PKN1Q16512 942 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 FSCN1Q16658 493 aaKnown RBP7.05□□□□□ -1.28
EPHA4-204ENST00000415749 SKIDA1Q1XH10 827 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 KRT24Q2M2I5 525 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 TTC38Q5R3I4 469 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 JAKMIP3Q5VZ66 844 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 NPNTQ6UXI9 565 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 ATG14Q6ZNE5 492 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 CILP2Q8IUL8 1156 aa7.05□□□□□ -1.28
EPHA4-204ENST00000415749 POU5F2Q8N7G0 328 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms