RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 DCP1BQ8IZD4 617 aaKnown RBP15.71■□□□□ 0.11
LIMS1-206ENST00000414829 PDCL2Q8N4E4 241 aa15.71■□□□□ 0.11
LIMS1-206ENST00000414829 BORCS6Q96GS4 357 aa15.71■□□□□ 0.11
LIMS1-206ENST00000414829 MMS19Q96T76 1030 aa15.71■□□□□ 0.11
LIMS1-206ENST00000414829 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-206ENST00000414829 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
LIMS1-206ENST00000414829 USP15Q9Y4E8 981 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-206ENST00000414829 TIMM13Q9Y5L4 95 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-206ENST00000414829 MBTPS2O43462 519 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 TACC1O75410 805 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 ZMYND10O75800 440 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 ABLIM3O94929 683 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 PAPLNO95428 1278 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 C8AP07357 584 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 TRIM49P0CI25 452 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 TRIM49CP0CI26 452 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
LIMS1-206ENST00000414829 ARPP19P56211 112 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 DLG4P78352 724 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 GPR17Q13304 367 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 CBX2Q14781 532 aaPredicted RBP15.7■□□□□ 0.1
LIMS1-206ENST00000414829 NFE2Q16621 373 aaPredicted RBP15.7■□□□□ 0.1
LIMS1-206ENST00000414829 STX1AQ16623 288 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 DPCR1Q3MIW9 517 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 SYCE2Q6PIF2 218 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 PLEKHO2Q8TD55 490 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 ZNF516Q92618 1163 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 FAM124BQ9H5Z6 455 aaPredicted RBP15.7■□□□□ 0.1
LIMS1-206ENST00000414829 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
LIMS1-206ENST00000414829 WDR27A2RRH5 827 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 P4HA2O15460 535 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 LETM1O95202 739 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 WARSP23381 471 aaKnown RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 GCLMP48507 274 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 MYL6P60660 151 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 CLUL1Q15846 466 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 WDR44Q5JSH3 913 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 RARS2Q5T160 578 aaKnown RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 GPR149Q86SP6 731 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 TCEAL8Q8IYN2 117 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 ELMOD1Q8N336 334 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 SUSD6Q92537 303 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 DUSP9Q99956 384 aaKnown RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 ZCWPW1Q9H0M4 648 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 XYLT2Q9H1B5 865 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 S1PR5Q9H228 398 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 DDX43Q9NXZ2 648 aaKnown RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-206ENST00000414829 MYO7AQ13402 2215 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 PRUNE2Q8WUY3 3088 aa15.69■□□□□ 0.1
LIMS1-206ENST00000414829 GABRDO14764 452 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 PMM2O15305 246 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 ADAM12O43184 909 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 ASS1P00966 412 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 HLA-DRAP01903 254 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 LRG1P02750 347 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 KCNQ1P51787 676 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 STX17P56962 302 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 SOWAHAQ2M3V2 549 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 TMC5Q6UXY8 1006 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 LIMS2Q7Z4I7 341 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 TMEM130Q8N3G9 435 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 SPPL2BQ8TCT7 592 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 SMG7Q92540 1137 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 SRRTQ9BXP5 876 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 PRKD2Q9BZL6 878 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 NIF3L1Q9GZT8 377 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 NAT10Q9H0A0 1025 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 CYP4F11Q9HBI6 524 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 ABCB6Q9NP58 842 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 CDH9Q9ULB4 789 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
LIMS1-206ENST00000414829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIMS1-206ENST00000414829 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 CST3P01034 146 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 BMP1P13497 986 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 TUFMP49411 452 aaKnown RBP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 ADCY1Q08828 1119 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 INTS6LQ5JSJ4 861 aaKnown RBP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 C1orf220Q5T0J3 134 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 RSPO2Q6UXX9 243 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-206ENST00000414829 C4orf50Q6ZRC1 276 aa15.67■□□□□ 0.1
LIMS1-206ENST00000414829 ADHFE1Q8IWW8 467 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms