RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LINC00301Q8NCQ3 95 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 HPS3Q969F9 1004 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 CBWD1Q9BRT8 395 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
ACTB-202ENST00000414620 LRRC3Q9BY71 257 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 OLFML3Q9NRN5 406 aa16.79■□□□□ 0.28
ACTB-202ENST00000414620 SPATA6Q9NWH7 488 aaPredicted RBP16.79■□□□□ 0.28
ACTB-202ENST00000414620 MORC2Q9Y6X9 1032 aaPredicted RBP16.79■□□□□ 0.28
ACTB-202ENST00000414620 SPTLC2O15270 562 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 ITGB3P05106 788 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 CYP11A1P05108 521 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 SP9P0CG40 484 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 POLR2BP30876 1174 aaKnown RBP16.78■□□□□ 0.28
ACTB-202ENST00000414620 SV2CQ496J9 727 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 SCARA3Q6AZY7 606 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 ADSSL1Q8N142 457 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 GLIS3Q8NEA6 775 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 DNASE1L2Q92874 299 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 DHX58Q96C10 678 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 ZNF560Q96MR9 790 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
ACTB-202ENST00000414620 DSEQ9UL01 958 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 NDRG2Q9UN36 371 aaKnown RBP16.78■□□□□ 0.28
ACTB-202ENST00000414620 PCDHB13Q9Y5F0 798 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 MYO15AQ9UKN7 3530 aa16.78■□□□□ 0.28
ACTB-202ENST00000414620 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 KPNA7A9QM74 516 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 PSMC3P17980 439 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 PAX3P23760 479 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 GABRR2P28476 465 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 ALCAMQ13740 583 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.28
ACTB-202ENST00000414620 CCDC65Q8IXS2 484 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 GIPC2Q8TF65 315 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 RSPRY1Q96DX4 576 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 BORCS6Q96GS4 357 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.28
ACTB-202ENST00000414620 ATXN3LQ9H3M9 355 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.28
ACTB-202ENST00000414620 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
ACTB-202ENST00000414620 SHISA7A6NL88 538 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 KRT19P08727 400 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 ATF6P18850 670 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 GARTP22102 1010 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 CYP4F8P98187 520 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 POU5F1Q01860 360 aaKnown RBP16.76■□□□□ 0.27
ACTB-202ENST00000414620 BFSP1Q12934 665 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 GPR158Q5T848 1215 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
ACTB-202ENST00000414620 ZNF852Q6ZMS4 543 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 GAREM2Q75VX8 874 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 LRRTM3Q86VH5 581 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 MAML2Q8IZL2 1156 aaPredicted RBP16.76■□□□□ 0.27
ACTB-202ENST00000414620 C1orf127Q8N9H9 656 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 DEPDC1BQ8WUY9 529 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 IRF7Q92985 503 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 PSMG2Q969U7 264 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 TNMDQ9H2S6 317 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 GREB1Q4ZG55 1949 aa16.76■□□□□ 0.27
ACTB-202ENST00000414620 PTPRDP23468 1912 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 ANAPC1Q9H1A4 1944 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 ZNF263O14978 683 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 LAMTOR5O43504 91 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 EXTL3O43909 919 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 PPP6R2O75170 966 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 LDHAP00338 332 aaKnown RBP16.75■□□□□ 0.27
ACTB-202ENST00000414620 ASIC1P78348 528 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 VEPH1Q14D04 833 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 E2F4Q16254 413 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 SHC4Q6S5L8 630 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 GPD1LQ8N335 351 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 SNX21Q969T3 373 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 MKNK1Q9BUB5 465 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 OSBPL6Q9BZF3 934 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 MTMR12Q9C0I1 747 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 GPR88Q9GZN0 384 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 PDE11AQ9HCR9 933 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 TMLHEQ9NVH6 421 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 ASB3Q9Y575 518 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 PIAS3Q9Y6X2 628 aa16.75■□□□□ 0.27
ACTB-202ENST00000414620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 CUTAO60888 179 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 YEATS4O95619 227 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 ACAT1P24752 427 aaKnown RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 TUFMP49411 452 aaKnown RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 GPR15P49685 360 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 ZC3H14Q6PJT7 736 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms