RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 VPS18Q9P253 973 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 REV1Q9UBZ9 1251 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MALT1Q9UDY8 824 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 FETUBQ9UGM5 382 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SAP30BPQ9UHR5 308 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZMYM5Q9UJ78 669 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MOSPD1Q9UJG1 213 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 DENND2AQ9ULE3 1009 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZMYND8Q9ULU4 1186 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 LRCH1Q9Y2L9 728 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MED16Q9Y2X0 877 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PCDHGB5Q9Y5G0 923 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 LOC100653049A0A140TA62 436 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ARHGAP10A1A4S6 786 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 GOLGA6L4A6NEF3 574 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 C16orf96A6NNT2 1141 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CHURC1-FNTBB4DL54 471 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 VWA5AO00534 786 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 MTSS1O43312 755 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CYTH3O43739 400 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 EXTL3O43909 919 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 KRT34O76011 436 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 URI1O94763 535 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RTN3O95197 1032 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 HTR3BO95264 441 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ATP5BP06576 529 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ASGR1P07306 291 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 HEXBP07686 556 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 POU2F2P09086 479 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 POLR2MP0CAP2 368 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RLBP1P12271 317 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 IDO1P14902 403 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 HPGDP15428 266 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ZFXP17010 805 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 PRKAR2BP31323 418 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 IDUAP35475 653 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 MAGEA10P43363 369 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CPA2P48052 419 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 FNTAP49354 379 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 VPS41P49754 854 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ERVFC1P60507 584 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DSTNP60981 165 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CDK17Q00537 523 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SSRP1Q08945 709 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TFCP2Q12800 502 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 EFEMP1Q12805 493 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 STRN3Q13033 797 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 GPS2Q13227 327 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CUL4BQ13620 913 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 AUHQ13825 339 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CBX2Q14781 532 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 LONRF2Q1L5Z9 754 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SLC10A6Q3KNW5 377 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 FBXO48Q5FWF7 155 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 NDUFAF5Q5TEU4 345 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 KANK2Q63ZY3 851 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CREB3L3Q68CJ9 461 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ADALQ6DHV7 355 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ARHGAP11AQ6P4F7 1023 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 LBX2Q6XYB7 198 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RGS9BPQ6ZS82 235 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CEP128Q6ZU80 1094 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 MICALCLQ6ZW33 695 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TTC6Q86TZ1 520 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 FAM9CQ8IZT9 166 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SPARTQ8N0X7 666 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 PRR18Q8N4B5 295 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CPA6Q8N4T0 437 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 FAM169BQ8N8A8 192 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ANKRD52Q8NB46 1076 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DTWD2Q8NBA8 298 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 FAM13CQ8NE31 585 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ST13P5Q8NFI4 369 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RFWD2Q8NHY2 731 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CEP76Q8TAP6 659 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CASP10Q92851 521 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TUBGCP3Q96CW5 907 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ART5Q96L15 291 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC74BQ96LY2 380 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM237Q96Q45 408 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RUFY1Q96T51 708 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TBCDQ9BTW9 1192 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DHRS4Q9BTZ2 278 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ACPTQ9BZG2 426 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 MCOLN1Q9GZU1 580 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SLC12A5Q9H2X9 1139 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TRIT1Q9H3H1 467 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DENND2DQ9H6A0 471 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 EHMT1Q9H9B1 1298 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 PDE7BQ9NP56 450 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ARFGAP3Q9NP61 516 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 A1CFQ9NQ94 594 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 NMRK1Q9NWW6 199 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ACTR10Q9NZ32 417 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SLAMF8Q9P0V8 285 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 DDX25Q9UHL0 483 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 RASAL2Q9UJF2 1139 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms