RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 RPL17P18621 184 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 DDX6P26196 483 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP54-202ENST00000413442 GBP2P32456 591 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 PSMC2P35998 433 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 MAGEA9P43362 315 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 MAGEA11P43364 429 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 PDE6CP51160 858 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 RBM10P98175 930 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 FKBP3Q00688 224 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CYP24A1Q07973 514 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 ADCY1Q08828 1119 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 TRPC3Q13507 836 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CFAP221Q4G0U5 840 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CT47A1Q5JQC4 288 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 ZBTB41Q5SVQ8 909 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 VSTM1Q6UX27 236 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 C4orf50Q6ZRC1 276 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CLEC17AQ6ZS10 378 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 PDZD4Q76G19 769 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 C12orf76Q8N812 135 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 TRIML1Q8N9V2 468 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CCDC150Q8NCX0 1101 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 SLC7A14Q8TBB6 771 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 RABGGTAQ92696 567 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 MSANTD3Q96H12 275 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 HPDLQ96IR7 371 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 NECAB3Q96P71 396 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 CGRRF1Q99675 332 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 TSG101Q99816 390 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 ZCWPW1Q9H0M4 648 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 BLZF1Q9H2G9 400 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 PCIF1Q9H4Z3 704 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 EPHX3Q9H6B9 360 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 KCNK12Q9HB15 430 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 TRPV4Q9HBA0 871 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 METTL14Q9HCE5 456 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 PDE11AQ9HCR9 933 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 COMMD8Q9NX08 183 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 UXTQ9UBK9 157 aaPredicted RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 CDH9Q9ULB4 789 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 MRPS23Q9Y3D9 190 aaKnown RBP6.87□□□□□ -1.31
USP54-202ENST00000413442 HCN4Q9Y3Q4 1203 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 PCDHB5Q9Y5E4 795 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 INSL5Q9Y5Q6 135 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 SCN1AP35498 2009 aa6.87□□□□□ -1.31
USP54-202ENST00000413442 BICDL2A1A5D9 508 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 TMEM221A6NGB7 291 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 C2CD4DB7Z1M9 353 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 M0R296 226 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 CETN3O15182 167 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PMM2O15305 246 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 NCAM2O15394 837 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PHACTR2O75167 634 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 RFPL2O75678 378 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 FGFR1OPO95684 399 aaKnown RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 NR3C1P04150 777 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 RHOP08100 348 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 KRT19P08727 400 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SPATA31D3P0C874 917 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 CSH1P0DML2 217 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 CSH2P0DML3 217 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 WARSP23381 471 aaKnown RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 CDC25CP30307 473 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 UBE2HP62256 183 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PRKCQQ04759 706 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SPAG1Q07617 926 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 ADAM9Q13443 819 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SNW1Q13573 536 aaKnown RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 TAF12Q16514 161 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PHLDB3Q6NSJ2 640 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 FAM171BQ6P995 826 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SPATA31D4Q6ZUB0 917 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 GRASPQ7Z6J2 395 aaPredicted RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 UNC93AQ86WB7 457 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 CBWD2Q8IUF1 395 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
USP54-202ENST00000413442 EFCAB13Q8IY85 973 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SLC44A3Q8N4M1 653 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 FBXL6Q8N531 539 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 RDH13Q8NBN7 331 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 KIAA0895Q8NCT3 520 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 DEPDC1BQ8WUY9 529 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 FGF13Q92913 245 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SMARCE1Q969G3 411 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PSMG2Q969U7 264 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 PBXIP1Q96AQ6 731 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 ELSPBP1Q96BH3 223 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 SAAL1Q96ER3 474 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 TNIP3Q96KP6 325 aa6.86□□□□□ -1.31
USP54-202ENST00000413442 B3GALT6Q96L58 329 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms