RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NPR3P17342 541 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 TNNI1P19237 187 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 PAX3P23760 479 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 EPHB3P54753 998 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 MYBPC2Q14324 1141 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 SNRNP35Q16560 246 aaKnown RBP10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 DUOXA2Q1HG44 320 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 TANGO2Q6ICL3 276 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 HS2ST1Q7LGA3 356 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 PDCL2Q8N4E4 241 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 TMEM105Q8N8V8 129 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 XXYLT1Q8NBI6 393 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 KIAA0895Q8NCT3 520 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 PRSS33Q8NF86 280 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 CXorf38Q8TB03 319 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 NXPE3Q969Y0 559 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 ZSWIM3Q96MP5 696 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 ZNF560Q96MR9 790 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 FNBP1Q96RU3 617 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 LPIN3Q9BQK8 851 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 ZCWPW1Q9H0M4 648 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 KIAA1586Q9HCI6 787 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 TMLHEQ9NVH6 421 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 ABI2Q9NYB9 513 aaPredicted RBP10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 ITGA11Q9UKX5 1188 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 L1RE1Q9UN81 338 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 MAPK8IP1Q9UQF2 711 aa10.96□□□□□ -0.65
NCKIPSD-202ENST00000413374 KRBA1A5PL33 1030 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZNF197O14709 1029 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 EXOC3O60645 756 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 MOSPD3O75425 235 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZNF202O95125 648 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 SRFP11831 508 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 RFX1P22670 979 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 PLA2G5P39877 138 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 PNPLA4P41247 253 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 CASP4P49662 377 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 GPR15P49685 360 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 CYP24A1Q07973 514 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 GRM2Q14416 872 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 SURF1Q15526 300 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 TEAD2Q15562 447 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 PRSS36Q5K4E3 855 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 KRBA2Q6ZNG9 492 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 MTSS1LQ765P7 747 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 TRAPPC11Q7Z392 1133 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 DNAJB7Q7Z6W7 309 aaPredicted RBP10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 OSTM1Q86WC4 334 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ELMO3Q96BJ8 720 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 HPDLQ96IR7 371 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 PI4K2AQ9BTU6 479 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 DNAJC25Q9H1X3 360 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZNF334Q9HCZ1 680 aaPredicted RBP10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ASAH2Q9NR71 780 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 DDX43Q9NXZ2 648 aaKnown RBP10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 MAFFQ9ULX9 164 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 ZFP37Q9Y6Q3 630 aaPredicted RBP10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYH11P35749 1972 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
NCKIPSD-202ENST00000413374 TRIP11Q15643 1979 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 UBE4BO95155 1302 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 A0A1W2PQ27 194 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 A0A1W2PQ64 194 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 A0A1W2PQD8 194 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 GOLGA6L4A6NEF3 574 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 H0Y858 1186 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 ATP2C2O75185 946 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 CLSTN1O94985 981 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 VIPR2P41587 438 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 NUCB2P80303 420 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 DPYDQ12882 1025 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 MYO1EQ12965 1108 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 PSMD2Q13200 908 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 PSMD6Q15008 389 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 BMT2Q1RMZ1 405 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 SOWAHAQ2M3V2 549 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 FAM78AQ5JUQ0 283 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 SDHAF4Q5VUM1 108 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 WDR49Q8IV35 697 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 DCP1BQ8IZD4 617 aaKnown RBP10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 LRRC52Q8N7C0 313 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 STKLD1Q8NE28 680 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 SHKBP1Q8TBC3 707 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 PLEKHO2Q8TD55 490 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 MMS19Q96T76 1030 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 CGRRF1Q99675 332 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 SLITRK6Q9H5Y7 841 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 GDE1Q9NZC3 331 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 WNT16Q9UBV4 365 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 GTF3C4Q9UKN8 822 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 TECTAO75443 2155 aa10.94□□□□□ -0.66
NCKIPSD-202ENST00000413374 FAM237AA0A1B0GTK4 181 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms