RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 ALKBH5Q6P6C2 394 aaKnown RBP16.16■□□□□ 0.18
PUDP-202ENST00000412827 TIFAQ96CG3 184 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 ZNF560Q96MR9 790 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 TUBB2BQ9BVA1 445 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 PLVAPQ9BX97 442 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 XYLT2Q9H1B5 865 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 LINC01553A4QN01 128 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 LRRN2O75325 713 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 PNPLA4P41247 253 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 PDE6CP51160 858 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 MYL6P60660 151 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 GNG11P61952 73 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 IFI16Q16666 785 aaKnown RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 COLGALT2Q8IYK4 626 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 LRRC52Q8N7C0 313 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 C1orf127Q8N9H9 656 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 EPS8L1Q8TE68 723 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 CLP1Q92989 425 aaKnown RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 ZMAT2Q96NC0 199 aaKnown RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 PI4K2AQ9BTU6 479 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 COLEC11Q9BWP8 271 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 NRDE2Q9H7Z3 1164 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 DPP3Q9NY33 737 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 NUB1Q9Y5A7 615 aa16.15■□□□□ 0.18
PUDP-202ENST00000412827 FNDC1Q4ZHG4 1894 aaPredicted RBP16.15■□□□□ 0.18
PUDP-202ENST00000412827 A0A0A6YYK5 440 aaPredicted RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 ARHGEF37A1IGU5 675 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 CASTOR2A6NHX0 329 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 MEFVO15553 781 aaPredicted RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 ALDH2P05091 517 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 RB1P06400 928 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 H2AFZP0C0S5 128 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 LRPAP1P30533 357 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 CTNNB1P35222 781 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 OR1G1P47890 313 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 AFF1P51825 1210 aaKnown RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 TERF1P54274 439 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 BCAR1P56945 870 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 CDR2Q01850 454 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 KCNT2Q6UVM3 1135 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 TRIM72Q6ZMU5 477 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 H2AFVQ71UI9 128 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 UBR7Q8N806 425 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 KAT5Q92993 513 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 TMEM169Q96HH4 297 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 C11orf84Q9BUA3 381 aaPredicted RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 APOBEC3GQ9HC16 384 aaKnown RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 MIOSQ9NXC5 875 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 SIX4Q9UIU6 781 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 NOCTQ9UK39 431 aaKnown RBP16.14■□□□□ 0.17
PUDP-202ENST00000412827 FAN1Q9Y2M0 1017 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 TRIP11Q15643 1979 aa16.14■□□□□ 0.17
PUDP-202ENST00000412827 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 DDX3XO00571 662 aaKnown RBP eCLIP16.13■□□□□ 0.17
PUDP-202ENST00000412827 PODXLO00592 558 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 CYP26A1O43174 497 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TRAPPC3O43617 180 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 CLSTN1O94985 981 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 ITGB3P05106 788 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 FAM163BP0C2L3 166 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 CYP11B1P15538 503 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 USP8P40818 1118 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 ELAVL2Q12926 359 aaKnown RBP16.13■□□□□ 0.17
PUDP-202ENST00000412827 ZNF280BQ86YH2 543 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 C18orf25Q96B23 403 aaPredicted RBP16.13■□□□□ 0.17
PUDP-202ENST00000412827 BCO2Q9BYV7 579 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 NKX2-4Q9H2Z4 354 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 CWH43Q9H720 699 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 SPG21Q9NZD8 308 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 YBX2Q9Y2T7 364 aaKnown RBP16.13■□□□□ 0.17
PUDP-202ENST00000412827 PRG3Q9Y2Y8 225 aaPredicted RBP16.13■□□□□ 0.17
PUDP-202ENST00000412827 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TDRD15B5MCY1 1934 aaKnown RBP16.13■□□□□ 0.17
PUDP-202ENST00000412827 RTN2O75298 545 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TACC1O75410 805 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 DDHD2O94830 711 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 GALTP07902 379 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 KRT19P08727 400 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 CASQ1P31415 396 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 PBX2P40425 430 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 SLC11A1P49279 550 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 ZNF132P52740 706 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 KRT17Q04695 432 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 SV2CQ496J9 727 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 DCLRE1AQ6PJP8 1040 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 SYT10Q6XYQ8 523 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 TRIM58Q8NG06 486 aa16.13■□□□□ 0.17
PUDP-202ENST00000412827 LNX1Q8TBB1 728 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms