RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TNRQ92752 1358 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 JCADQ9P266 1359 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 A0A088AWK7 358 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CFAP69A5D8W1 941 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CAPN14A8MX76 684 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DIRC3C9JPN6 131 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MYO1CO00159 1063 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HAUS5O94927 633 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 THP07101 528 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 XRCC6P12956 609 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TYRP14679 529 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PEX2P28328 305 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PIK3CGP48736 1102 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 AGFG1P52594 562 aaKnown RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANTXR2P58335 489 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RAB1AP62820 205 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RAB32Q13637 225 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RIN1Q13671 783 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZNF267Q14586 743 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RRP1BQ14684 758 aaKnown RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CNN3Q15417 329 aaKnown RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 C3orf36Q3SXR2 165 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DCAF17Q5H9S7 520 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 OTUD7BQ6GQQ9 843 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ABHD15Q6UXT9 468 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZNF783Q6ZMS7 281 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DOK3Q7L591 496 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HEATR3Q7Z4Q2 680 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GRASPQ7Z6J2 395 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DPP9Q86TI2 863 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PLXDC1Q8IUK5 500 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 BCL6BQ8N143 479 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SVIPQ8NHG7 77 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LTV1Q96GA3 475 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RPL10LQ96L21 214 aaKnown RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RPS6KC1Q96S38 1066 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MPHOSPH6Q99547 160 aaKnown RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 B3GNT5Q9BYG0 378 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIAA1586Q9HCI6 787 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NLRC4Q9NPP4 1024 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DMRT3Q9NQL9 472 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANLNQ9NQW6 1124 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DDX21Q9NR30 783 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ABCF2Q9UG63 623 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 AJAP1Q9UKB5 411 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LIMCH1Q9UPQ0 1083 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NR2E3Q9Y5X4 410 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIF14Q15058 1648 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NPHP4O75161 1426 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FGD6Q6ZV73 1430 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CEP170BQ9Y4F5 1589 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ABCC3O15438 1527 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 C2orf78A6NCI8 922 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GOLGA6L6A8MZA4 724 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MATN2O00339 956 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PRPF3O43395 683 aaKnown RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PQBP1O60828 265 aaKnown RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SOAT2O75908 522 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 INMTO95050 263 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 POMCP01189 267 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TSPY4P0CV99 314 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TSPY10P0CW01 314 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 IDEP14735 1019 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MALP21145 153 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GUCY1A2P33402 732 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MAP2K6P52564 334 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CLRN1P58418 232 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RHBDL3P58872 404 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 POU6F2P78424 691 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ATP2C1P98194 919 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TLE1Q04724 770 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HGFACQ04756 655 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PIGFQ07326 219 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PPP3CAQ08209 521 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GRM3Q14832 879 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 AMOTQ4VCS5 1084 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DACT2Q5SW24 774 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FKBP15Q5T1M5 1219 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ARMC6Q6NXE6 501 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 EFCAB12Q6NXP0 572 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GGT6Q6P531 493 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM111BQ6SJ93 734 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NPNTQ6UXI9 565 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SEM1Q6ZVN7 128 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LARP4Q71RC2 724 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PDSS2Q86YH6 399 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM186BQ8IYM0 893 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TRMT2AQ8IZ69 625 aaKnown RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIAA0319LQ8IZA0 1049 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KRT78Q8N1N4 520 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SDR16C5Q8N3Y7 309 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 D2HGDHQ8N465 521 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 OR6B3Q8NGW1 331 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DPF2Q92785 391 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PGBD4Q96DM1 585 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 UNKQ9C0B0 810 aaKnown RBP3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 BRD9Q9H8M2 597 aa3.16□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZNF287Q9HBT7 754 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms