RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 ANKRD35Q8N283 1001 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 TMTC2Q8N394 836 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 ATP11CQ8NB49 1132 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 OR56A3Q8NH54 315 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 BRI3BPQ8WY22 251 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 DDX17Q92841 729 aaKnown RBP6.17□□□□□ -1.42
LSM5-206ENST00000409987 CRB3Q9BUF7 120 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 ZCCHC4Q9H5U6 513 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 CDC23Q9UJX2 597 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 LZTS1Q9Y250 596 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 PCDHGB2Q9Y5G2 931 aa6.17□□□□□ -1.42
LSM5-206ENST00000409987 LEFTY2O00292 366 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 CKBP12277 381 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 IL1R1P14778 569 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 FDXRP22570 491 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 POU6F2P78424 691 aaPredicted RBP6.16□□□□□ -1.42
LSM5-206ENST00000409987 UBXN11Q5T124 520 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 ANO1Q5XXA6 986 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 Q6ZRM9 215 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 Q6ZSN1 163 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 ZNF808Q8N4W9 903 aaPredicted RBP6.16□□□□□ -1.42
LSM5-206ENST00000409987 SLC15A4Q8N697 577 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 NUP133Q8WUM0 1156 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 SNX22Q96L94 193 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 SELENOOQ9BVL4 669 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 ARFGAP3Q9NP61 516 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 GJB4Q9NTQ9 266 aa6.16□□□□□ -1.42
LSM5-206ENST00000409987 VSX1Q9NZR4 365 aaPredicted RBP6.16□□□□□ -1.42
LSM5-206ENST00000409987 CCDC78A2IDD5 438 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MBD3L4A6NDZ8 208 aaPredicted RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 MBD3L3A6NE82 208 aaPredicted RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 CAPN14A8MX76 684 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 PATE3B3GLJ2 98 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 PYCARD-AS1I3L0S3 204 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MT-ND5P03915 603 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 FGFR2P21802 821 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 SLC35G1Q2M3R5 365 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 SLC44A4Q53GD3 710 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 FAM102AQ5T9C2 384 aaPredicted RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 DCAF12L1Q5VU92 463 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 NAIF1Q69YI7 327 aaPredicted RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 GLB1LQ6UWU2 654 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MAMDC4Q6UXC1 1216 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 SPOCD1Q6ZMY3 1216 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 SGMS1Q86VZ5 419 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 MPP5Q8N3R9 675 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 FAM46DQ8NEK8 389 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 DNERQ8NFT8 737 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 MNTQ99583 582 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 SPATA5L1Q9BVQ7 753 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 A1CFQ9NQ94 594 aaKnown RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 ETAA1Q9NY74 926 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 MAP3K20Q9NYL2 800 aaKnown RBP6.15□□□□□ -1.42
LSM5-206ENST00000409987 MYO1AQ9UBC5 1043 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 XPR1Q9UBH6 696 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 CDYLQ9Y232 598 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 PAXBP1Q9Y5B6 917 aa6.15□□□□□ -1.42
LSM5-206ENST00000409987 ANXA2P07355 339 aaKnown RBP6.14□□□□□ -1.43
LSM5-206ENST00000409987 COMTP21964 271 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 KLRC1P26715 233 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 APOBEC3AP31941 199 aaPredicted RBP6.14□□□□□ -1.43
LSM5-206ENST00000409987 MAN1A1P33908 653 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 HSPA7P48741 367 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 MAPK10P53779 464 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 MXRA7P84157 204 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 NHLH2Q02577 135 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 HHEXQ03014 270 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 BOP1Q14137 746 aaKnown RBP6.14□□□□□ -1.43
LSM5-206ENST00000409987 ARL13BQ3SXY8 428 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 TUBB8Q3ZCM7 444 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 AGAP9Q5VTM2 703 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 FAM160B1Q5W0V3 765 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 MYLK4Q86YV6 388 aaPredicted RBP6.14□□□□□ -1.43
LSM5-206ENST00000409987 RHOT2Q8IXI1 618 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 GSPT2Q8IYD1 628 aaKnown RBP6.14□□□□□ -1.43
LSM5-206ENST00000409987 CFAP52Q8N1V2 620 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 ANKRD42Q8N9B4 389 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 Q8TCH9 128 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 IQCDQ96DY2 449 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 RBM15Q96T37 977 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSM5-206ENST00000409987 CNPPD1Q9BV87 410 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 SIK2Q9H0K1 926 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 CHST8Q9H2A9 424 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 SERHLQ9NQF3 203 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 ZNF69Q9UC07 566 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
LSM5-206ENST00000409987 RPS6KL1Q9Y6S9 549 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms