RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 G3BP1Q13283 466 aaKnown RBP eCLIP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 DOC2BQ14184 412 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CNGA2Q16280 664 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 C1orf220Q5T0J3 134 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CAPRIN2Q6IMN6 1127 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 YTHDF3Q7Z739 585 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CAVIN3Q969G5 261 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ZNF778Q96MU6 729 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CDCA3Q99618 268 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 HEMGNQ9BXL5 484 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 KCNK13Q9HB14 408 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NMRK1Q9NWW6 199 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 Q9Y3F1 56 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 PITPNM1O00562 1244 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 CTAGE5O15320 804 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 CSDE1O75534 798 aaKnown RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 PAEPP09466 180 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 TAC1P20366 129 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 ATP4AP20648 1035 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 FGFR2P21802 821 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 HSPA9P38646 679 aaKnown RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 VPS41P49754 854 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 KPNA1P52294 538 aaPredicted RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 ACLYP53396 1101 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 KYNUQ16719 465 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 KIAA0753Q2KHM9 967 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 RHBDF2Q6PJF5 856 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 CASC1Q6TDU7 716 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 FCHSD1Q86WN1 690 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 TMEM105Q8N8V8 129 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 Q8N9G6 341 aaPredicted RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF280CQ8ND82 737 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 ACTRT2Q8TDY3 377 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 SLC5A5Q92911 643 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 XPNPEP3Q9NQH7 507 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 TJP2Q9UDY2 1190 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 SHROOM3Q8TF72 1996 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 HELZP42694 1942 aaKnown RBP3.34□□□□□ -1.88
RGPD3-202ENST00000409886 USF3Q68DE3 2245 aa3.34□□□□□ -1.88
RGPD3-202ENST00000409886 CCT8L1PA6NM43 557 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TCP10L2B9ZVM9 353 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ZBTB43O43298 467 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 FESP07332 822 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ETS1P14921 441 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ERCC5P28715 1186 aaPredicted RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CCR10P46092 362 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 GJA9P57773 515 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CBWD6Q4V339 395 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 LACTB2Q53H82 288 aaPredicted RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CBWD3Q5JTY5 395 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 KIAA1755Q5JYT7 1200 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CBWD5Q5RIA9 395 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TRIM72Q6ZMU5 477 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 SYNE3Q6ZMZ3 975 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 SYCP3Q8IZU3 236 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 SLC20A1Q8WUM9 679 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 NELL1Q92832 810 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 PLEKHG4BQ96PX9 1271 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TMEM121BQ9BXQ6 578 aaPredicted RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 UBA5Q9GZZ9 404 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TDRD3Q9H7E2 651 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ATP6V0A4Q9HBG4 840 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 FLRT1Q9NZU1 646 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 USP17L12C9JPN9 530 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 USP17L21D6R901 530 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 H3BNC9 293 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 LILRB5O75023 590 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ZC3H11AO75152 810 aaKnown RBP eCLIP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 C1QAP02745 245 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CA3P07451 260 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 PYGMP11217 842 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 KCNA5P22460 613 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 GTF2H1P32780 548 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 PPP1R2P41236 205 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 DIXDC1Q155Q3 683 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 RINT1Q6NUQ1 792 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 PPP1R2P3Q6NXS1 205 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 USP17L2Q6R6M4 530 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 NT5DC3Q86UY8 548 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TICAM2Q86XR7 235 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 FAM133AQ8N9E0 248 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 FBXO22Q8NEZ5 403 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 ADAM32Q8TC27 787 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 APPBP2Q92624 585 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 NAF1Q96HR8 494 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CADM1Q9BY67 442 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 IFIH1Q9BYX4 1025 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 NAT10Q9H0A0 1025 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 BRD8Q9H0E9 1235 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 NAPBQ9H115 298 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 MROH8Q9H579 483 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 HAUS4Q9H6D7 363 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 CHD8Q9HCK8 2581 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 MCM3APO60318 1980 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 TCP11X1B4DZS4 312 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 VILLO15195 856 aa3.33□□□□□ -1.88
RGPD3-202ENST00000409886 RNF113AO15541 343 aaKnown RBP3.33□□□□□ -1.88
RGPD3-202ENST00000409886 HNRNPRO43390 633 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms