RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CRISPLD2Q9H0B8 497 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 LHX5Q9H2C1 402 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 KLK14Q9P0G3 267 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 PARP2Q9UGN5 583 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 BARX2Q9UMQ3 279 aaPredicted RBP5.88□□□□□ -1.47
EPHA4-202ENST00000409854 HYOU1Q9Y4L1 999 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 EFCAB8A8MWE9 144 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 TLR3O15455 904 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 SKIP12755 728 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 CCL5P13501 91 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ITGA4P13612 1032 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ZSCAN20P17040 1043 aaPredicted RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 CDH8P55286 799 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 GSCP56915 257 aaPredicted RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 C1QBPQ07021 282 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NFX1Q12986 1120 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 RSRC2Q7L4I2 434 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF598Q86UK7 904 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NT5DC3Q86UY8 548 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM176AQ96HP8 235 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 OSBPL9Q96SU4 736 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 PRDM16Q9HAZ2 1276 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 HMGXB4Q9UGU5 601 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 PCNTO95613 3336 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 TCRBV5S1A1TA0A578 114 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MEIS3P2A8K0S8 358 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MED7O43513 233 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 BUB1BO60566 1050 aaPredicted RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 FAM163BP0C2L3 166 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 VDRP11473 427 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MMP8P22894 467 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NSFP46459 744 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MNX1P50219 401 aaPredicted RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NAP1L1P55209 391 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MTFR1Q15390 333 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NAA35Q5VZE5 725 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF653Q96CK0 615 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 HES6Q96HZ4 224 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 RGS18Q9NS28 235 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 SLC38A7Q9NVC3 462 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 KIAA1257Q9ULG3 409 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NME7Q9Y5B8 376 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 DNAH12Q6ZR08 3092 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 SPTLC1O15269 473 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NCK2O43639 380 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 SRGAP2O75044 1071 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 KIF4AO95239 1232 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 FTCDO95954 541 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 MLH1P40692 756 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 TAF6P49848 677 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ITIH3Q06033 890 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 SV2CQ496J9 727 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 PLEKHA7Q6IQ23 1121 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 UNC93AQ86WB7 457 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 WDTC1Q8N5D0 677 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 KBTBD7Q8WVZ9 684 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 LINC01599Q8WXQ3 324 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 CPA5Q8WXQ8 436 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ZFP42Q96MM3 310 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 NUP85Q9BW27 656 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 UBN1Q9NPG3 1134 aa5.87□□□□□ -1.47
EPHA4-202ENST00000409854 CNOT8Q9UFF9 292 aaKnown RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 COL4A4P53420 1690 aaPredicted RBP5.87□□□□□ -1.47
EPHA4-202ENST00000409854 ARL5CA6NH57 179 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 C9IYK1 514 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PITPNM1O00562 1244 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ATMINO43313 823 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TFRCP02786 760 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 SELPP16109 830 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 SSR1P43307 286 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 NDST1P52848 882 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 FAM189BP81408 668 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CKAP4Q07065 602 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 SOWAHAQ2M3V2 549 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF394Q53GI3 561 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 C1orf53Q5VUE5 145 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 LRRC8DQ7L1W4 858 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ECHDC2Q86YB7 292 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TOP6BLQ8N6T0 577 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DNAJC5GQ8N7S2 189 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM35BQ8NCS4 154 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 MNS1Q8NEH6 495 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF564Q8TBZ8 553 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 COG1Q8WTW3 980 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 PGBD4Q96DM1 585 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RPGRIP1Q96KN7 1286 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 DEFB118Q96PH6 123 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RPS6KC1Q96S38 1066 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 ADAM2Q99965 735 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 MRPL45Q9BRJ2 306 aaKnown RBP5.86□□□□□ -1.47
EPHA4-202ENST00000409854 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 MIOSQ9NXC5 875 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 CTTNBP2NLQ9P2B4 639 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 RNF14Q9UBS8 474 aa5.86□□□□□ -1.47
EPHA4-202ENST00000409854 VWA8A3KMH1 1905 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms