RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TAS1R2Q8TE23 839 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 KBTBD7Q8WVZ9 684 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 SYAP1Q96A49 352 aaPredicted RBP24.01■■□□□ 1.43
PTCD3-203ENST00000409783 ELMO3Q96BJ8 720 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 ADAM7Q9H2U9 754 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 METTL14Q9HCE5 456 aaKnown RBP24.01■■□□□ 1.43
PTCD3-203ENST00000409783 DPP7Q9UHL4 492 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 USP15Q9Y4E8 981 aaPredicted RBP24.01■■□□□ 1.43
PTCD3-203ENST00000409783 ZMYND10O75800 440 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 ASS1P00966 412 aaKnown RBP24■■□□□ 1.43
PTCD3-203ENST00000409783 ATF2P15336 505 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 ERCC5P28715 1186 aaPredicted RBP24■■□□□ 1.43
PTCD3-203ENST00000409783 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
PTCD3-203ENST00000409783 ITIH3Q06033 890 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 GPR17Q13304 367 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 SMAD2Q15796 467 aaKnown RBP24■■□□□ 1.43
PTCD3-203ENST00000409783 WDR72Q3MJ13 1102 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 TJAP1Q5JTD0 557 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 TPGS2Q68CL5 300 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 RNF19BQ6ZMZ0 732 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 ZNF707Q96C28 371 aaPredicted RBP24■■□□□ 1.43
PTCD3-203ENST00000409783 ZCWPW1Q9H0M4 648 aa24■■□□□ 1.43
PTCD3-203ENST00000409783 LRRN2O75325 713 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 SEC24AO95486 1093 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 ZNF699Q32M78 642 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 KRT39Q6A163 491 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 TMC5Q6UXY8 1006 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 GPR149Q86SP6 731 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 LRRTM3Q86VH5 581 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 IRF2BP1Q8IU81 584 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 ADGRF2Q8IZF7 708 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 MMRN2Q9H8L6 949 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 ZDHHC7Q9NXF8 308 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 AFF4Q9UHB7 1163 aaKnown RBP23.99■■□□□ 1.43
PTCD3-203ENST00000409783 POLIQ9UNA4 740 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 DOCK6Q96HP0 2047 aa23.99■■□□□ 1.43
PTCD3-203ENST00000409783 DENND4AQ7Z401 1863 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 HCRTO43612 131 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 TACC1O75410 805 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 C8AP07357 584 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 FAM163BP0C2L3 166 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CPB1P15086 417 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 WARSP23381 471 aaKnown RBP23.98■■□□□ 1.43
PTCD3-203ENST00000409783 MXI1P50539 228 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 SGSM1Q2NKQ1 1148 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 KLHL40Q2TBA0 621 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 UVSSAQ2YD98 709 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CCDC40Q4G0X9 1142 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CBWD6Q4V339 395 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 DCAF17Q5H9S7 520 aaPredicted RBP23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CT47A1Q5JQC4 288 aaPredicted RBP23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CBWD3Q5JTY5 395 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 CBWD5Q5RIA9 395 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 TCERG1LQ5VWI1 586 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 TRIM59Q8IWR1 403 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 TCEAL8Q8IYN2 117 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 THEM5Q8N1Q8 247 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 TAF4BQ92750 862 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 SEMA4DQ92854 862 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 MRPL45Q9BRJ2 306 aaKnown RBP23.98■■□□□ 1.43
PTCD3-203ENST00000409783 RHOBTB2Q9BYZ6 727 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 DDX43Q9NXZ2 648 aaKnown RBP23.98■■□□□ 1.43
PTCD3-203ENST00000409783 DACH1Q9UI36 760 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 NME7Q9Y5B8 376 aa23.98■■□□□ 1.43
PTCD3-203ENST00000409783 C5orf42Q9H799 3197 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 CCDC195A0A1B0GUA6 201 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 STX10O60499 249 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 GNA14O95837 355 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 WEE2P0C1S8 567 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 PIK3CAP42336 1068 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 LHX1P48742 406 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 ZNF667Q5HYK9 610 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 SPOPLQ6IQ16 392 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 CAVIN1Q6NZI2 390 aaKnown RBP23.97■■□□□ 1.43
PTCD3-203ENST00000409783 ELMSAN1Q6PJG2 1045 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 RTL10Q7L3V2 364 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 SLC7A14Q8TBB6 771 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 MMS19Q96T76 1030 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 PKMYT1Q99640 499 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 ACBD6Q9BR61 282 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 PI4K2AQ9BTU6 479 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 SDCBP2Q9H190 292 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 CRISPLD1Q9H336 500 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 APOBEC3GQ9HC16 384 aaKnown RBP23.97■■□□□ 1.43
PTCD3-203ENST00000409783 NXF1Q9UBU9 619 aaKnown RBP23.97■■□□□ 1.43
PTCD3-203ENST00000409783 MAFFQ9ULX9 164 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 COQ4Q9Y3A0 265 aa23.97■■□□□ 1.43
PTCD3-203ENST00000409783 MTMR11A4FU01 709 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 LMO2P25791 158 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 HOXA9P31269 272 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 TNNC1P63316 161 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 ADCY1Q08828 1119 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 LIN9Q5TKA1 542 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 PRKD2Q9BZL6 878 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 SMYD3Q9H7B4 428 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 TMLHEQ9NVH6 421 aa23.96■■□□□ 1.43
PTCD3-203ENST00000409783 NOTCH4Q99466 2003 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 PMM2O15305 246 aa23.95■■□□□ 1.42
PTCD3-203ENST00000409783 FGFR1OPO95684 399 aaKnown RBP23.95■■□□□ 1.42
PTCD3-203ENST00000409783 HNRNPA1P09651 372 aaKnown RBP eCLIP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms