RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ADH1BP00325 375 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PENKP01210 267 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 C1QAP02745 245 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ATP5BP06576 529 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 BCRP11274 1271 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 MPSTP25325 297 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PTDSS1P48651 473 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 CTCFP49711 727 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 PAPOLAP51003 745 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 ITGA8P53708 1063 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 FKBP1AP62942 108 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 GPSM2P81274 684 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 GTF2BQ00403 316 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 MAP2K1Q02750 393 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 AP1B1Q10567 949 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 TRAF1Q13077 416 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PABPC4Q13310 644 aaKnown RBP eCLIP3.33□□□□□ -1.881e-10■■■■■ 45.5
CUL3-204ENST00000409777 GRM2Q14416 872 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 TAF11Q15544 211 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 SCN9AQ15858 1988 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PLEKHG4Q58EX7 1191 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ACAD10Q6JQN1 1059 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 CLNKQ7Z7G1 428 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 SDCCAG8Q86SQ7 713 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 MYPNQ86TC9 1320 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 CPNE8Q86YQ8 564 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 KIRREL3Q8IZU9 778 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ANKRD35Q8N283 1001 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 UBR7Q8N806 425 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PHC3Q8NDX5 983 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZNF564Q8TBZ8 553 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 MFSD14AQ96MC6 490 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 TTC25Q96NG3 672 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 CADM1Q9BY67 442 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 TRIM31Q9BZY9 425 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 OSBPL2Q9H1P3 480 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 IL21Q9HBE4 155 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PARVGQ9HBI0 331 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 DDX4Q9NQI0 724 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 NMRK1Q9NWW6 199 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 MKS1Q9NXB0 559 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 WRAP73Q9P2S5 460 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 STX18Q9P2W9 335 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 PHTF1Q9UMS5 762 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PLA2G4CQ9UP65 541 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 DRG1Q9Y295 367 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 RABGAP1Q9Y3P9 1069 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 FNDC1Q4ZHG4 1894 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZSWIM8A7E2V4 1837 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 A0A0G2JMZ2 1700 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 LRRC37A2A6NM11 1700 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NDC80O14777 642 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 EXOC3O60645 756 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 MAGEC1O60732 1142 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZC3H11AO75152 810 aaKnown RBP eCLIP3.33□□□□□ -1.88
CUL3-204ENST00000409777 SKAP2O75563 359 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZWINTO95229 277 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 SGPL1O95470 568 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 CAPNS1P04632 268 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 RRM1P23921 792 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NMT1P30419 496 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 VHLP40337 213 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ETV4P43268 484 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 IFNAR2P48551 515 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NEK3P51956 506 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NCKAP1LP55160 1127 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 IL9RQ01113 521 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 RNASELQ05823 741 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 BTKQ06187 659 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 RASA3Q14644 834 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PDCD2Q16342 344 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 DCAF17Q5H9S7 520 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 SLC30A9Q6PML9 568 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 HHIPL2Q6UWX4 724 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 MON1BQ7L1V2 547 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NIPA1Q7RTP0 329 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 SLC51AQ86UW1 340 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZNF677Q86XU0 584 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 LRRC47Q8N1G4 583 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 SUPT20HQ8NEM7 779 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PARD3BQ8TEW8 1205 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PMM1Q92871 262 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 PTPRN2Q92932 1015 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NKD2Q969F2 451 aaPredicted RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 FAM81BQ96LP2 452 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 GMLQ99445 158 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 POP1Q99575 1024 aaKnown RBP3.33□□□□□ -1.88
CUL3-204ENST00000409777 SPSB2Q99619 263 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 TUBB6Q9BUF5 446 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 NUP85Q9BW27 656 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 VPS11Q9H270 941 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 BHMT2Q9H2M3 363 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 IKZF4Q9H2S9 585 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ETNK1Q9HBU6 452 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 KIAA1586Q9HCI6 787 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 CHST7Q9NS84 486 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 KRT82Q9NSB4 513 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 LRRC4BQ9NT99 713 aa3.33□□□□□ -1.88
CUL3-204ENST00000409777 ZNF212Q9UDV6 495 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms