RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 ZBED6P86452 979 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 DSG1Q02413 1049 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 TBX2Q13207 712 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 STILQ15468 1287 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 MAPRE1Q15691 268 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 OVOS1Q6IE37 1185 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 SPOPLQ6IQ16 392 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 CACNA2D4Q7Z3S7 1137 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 TMEM173Q86WV6 379 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 KBTBD7Q8WVZ9 684 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 TIFAQ96CG3 184 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 KREMEN1Q96MU8 473 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 MMS19Q96T76 1030 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 ACBD6Q9BR61 282 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 UBE2TQ9NPD8 197 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 FNIP2Q9P278 1114 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 HCSTQ9UBK5 93 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 MAFFQ9ULX9 164 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 YBX2Q9Y2T7 364 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 LUC7L2Q9Y383 392 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 BACE2Q9Y5Z0 518 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 PLXNA3P51805 1871 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 URODP06132 367 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 CTSAP10619 480 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 ACO1P21399 889 aaKnown RBP13.91□□□□□ -0.18
LIMS2-203ENST00000409254 ANXA13P27216 316 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 GSDMDP57764 484 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 POLR2FP61218 127 aaKnown RBP13.91□□□□□ -0.18
LIMS2-203ENST00000409254 IQCEQ6IPM2 695 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 PPFIBP1Q86W92 1011 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 ARHGEF19Q8IW93 802 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 DRC7Q8IY82 874 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 FAM71AQ8IYT1 594 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 THEM5Q8N1Q8 247 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 KLHL23Q8NBE8 558 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 BCL7CQ8WUZ0 217 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-203ENST00000409254 BAP1Q92560 729 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 TATDN2Q93075 761 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 ZBP1Q9H171 429 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 SMYD3Q9H7B4 428 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 MTRRQ9UBK8 725 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 CDH9Q9ULB4 789 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 DENND4CQ5VZ89 1909 aa13.91□□□□□ -0.18
LIMS2-203ENST00000409254 GRXCR1A8MXD5 290 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 TBC1D4O60343 1298 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 CLSTN1O94985 981 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 STAT1P42224 750 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 BRCC3P46736 316 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 WSCD1Q658N2 575 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 SLC8B1Q6J4K2 584 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 RTL10Q7L3V2 364 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 ZNF677Q86XU0 584 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 CRYBG2Q8N1P7 616 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 DNAJC7Q99615 494 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 VN1R3Q9BXE9 311 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 AIPL1Q9NZN9 384 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 HSFX1Q9UBD0 423 aa13.9□□□□□ -0.18
LIMS2-203ENST00000409254 BZW2Q9Y6E2 419 aaKnown RBP13.9□□□□□ -0.18
LIMS2-203ENST00000409254 BRWD1Q9NSI6 2320 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 EPHB6O15197 1021 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 MFAP3LO75121 409 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 LRRN2O75325 713 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 FERP16591 822 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 TKTP29401 623 aaKnown RBP13.89□□□□□ -0.19
LIMS2-203ENST00000409254 SOX5P35711 763 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 GNL1P36915 607 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-203ENST00000409254 PBX3P40426 434 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 PRKCIP41743 596 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 KLK7P49862 253 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 TSPY1Q01534 308 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 RAPGEF1Q13905 1077 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-203ENST00000409254 KIAA0319Q5VV43 1072 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 KIAA1841Q6NSI8 718 aa13.89□□□□□ -0.19
LIMS2-203ENST00000409254 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms