RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 TRAPPC3O43617 180 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 CYP11A1P05108 521 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 MMEP08473 750 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TNNT1P13805 278 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 CD58P19256 250 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TYMPP19971 482 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 SGO2Q562F6 1265 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 CLLU1OSQ5K130 101 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 ARHGAP17Q68EM7 881 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 PHF13Q86YI8 300 aaPredicted RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 C17orf53Q8N3J3 647 aaPredicted RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TMEM35BQ8NCS4 154 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TRIM58Q8NG06 486 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 CTNNBL1Q8WYA6 563 aaPredicted RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 SECISBP2LQ93073 1101 aaKnown RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 SCLYQ96I15 445 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 PCDHB18PQ96TA0 734 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 LACRTQ9GZZ8 138 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 PDCL3Q9H2J4 239 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
RAB1C-201ENST00000409159 PAXBP1Q9Y5B6 917 aa11.95□□□□□ -0.5
RAB1C-201ENST00000409159 NCANO14594 1321 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 CYB561D2O14569 222 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 MTA2O94776 668 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 POMCP01189 267 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 FTLP02792 175 aaPredicted RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 ODC1P11926 461 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 GNL1P36915 607 aaPredicted RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 CLCNKBP51801 687 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 NDST1P52848 882 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 GALCP54803 685 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 CDH8P55286 799 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SNX16P57768 344 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 GPC5P78333 572 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 ELAVL2Q12926 359 aaKnown RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 LCLAT1Q6UWP7 414 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SCARA5Q6ZMJ2 495 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 METTL23Q86XA0 190 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 MSANTD4Q8NCY6 345 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 RFFLQ8WZ73 363 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SUSD3Q96L08 255 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 CASD1Q96PB1 797 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 ALS2CR12Q96Q35 445 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 COLEC11Q9BWP8 271 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 OXCT2Q9BYC2 517 aaPredicted RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 ELOVL4Q9GZR5 314 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 LZTFL1Q9NQ48 299 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 SEPT11Q9NVA2 429 aaKnown RBP11.94□□□□□ -0.5
RAB1C-201ENST00000409159 TBC1D13Q9NVG8 400 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 GTF3C4Q9UKN8 822 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 L1RE1Q9UN81 338 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 STXBP5LQ9Y2K9 1186 aa11.94□□□□□ -0.5
RAB1C-201ENST00000409159 O00370 1275 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 B3GAT3O94766 335 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 AMHP03971 560 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 CYP1A2P05177 515 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 PCSK1P29120 753 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 NSFP46459 744 aaKnown RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 AFF1P51825 1210 aaKnown RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 GNG11P61952 73 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 NOMO3P69849 1222 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 RNASELQ05823 741 aaKnown RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 DSTYKQ6XUX3 929 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 ADGRF2Q8IZF7 708 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 LRRC43Q8N309 656 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 PDCL2Q8N4E4 241 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 TOP1MTQ969P6 601 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 ELMO3Q96BJ8 720 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 VWCEQ96DN2 955 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 C16orf45Q96MC5 204 aaPredicted RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 HEXIM2Q96MH2 286 aaKnown RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 HTATIP2Q9BUP3 242 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 IL23AQ9NPF7 189 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 CYLDQ9NQC7 956 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
RAB1C-201ENST00000409159 STK39Q9UEW8 545 aa11.93□□□□□ -0.5
RAB1C-201ENST00000409159 STRIP2Q9ULQ0 834 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms