RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 NCOA4Q13772 614 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 SHCBP1Q8NEM2 672 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 KLHL4Q9C0H6 718 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 EXOSC4Q9NPD3 245 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 HERC5Q9UII4 1024 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ZNF609O15014 1411 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 PRR36Q9H6K5 1346 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 FKBP9O95302 570 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 PYGMP11217 842 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RALBP11234 206 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 WDR72Q3MJ13 1102 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 XKR3Q5GH77 459 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 TADA1Q96BN2 335 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 NAT9Q9BTE0 207 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 MAGI3Q5TCQ9 1506 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 A0A0A6YYK5 440 aaPredicted RBP13.53□□□□□ -0.24
RNF43-201ENST00000407977 CST8O60676 142 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 CNTFP26441 200 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ACADSBP45954 432 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 NUDT2P50583 147 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 CCDC103Q8IW40 242 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 VPS37AQ8NEZ2 397 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 ARHGEF40Q8TER5 1519 aa13.53□□□□□ -0.24
RNF43-201ENST00000407977 MYO1GB0I1T2 1018 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 DFFAO00273 331 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 RALAP11233 206 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 RAB42Q8N4Z0 105 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 KIF12Q96FN5 646 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 PPP1R36Q96LQ0 422 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 KLHL11Q9NVR0 708 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 TUBGCP4Q9UGJ1 667 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 TAGLN3Q9UI15 199 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 LRCH1Q9Y2L9 728 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.24
RNF43-201ENST00000407977 FDFT1P37268 417 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.24
RNF43-201ENST00000407977 FOXO4P98177 505 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 CATSPER2Q96P56 530 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 ITGB1BP2Q9UKP3 347 aa13.52□□□□□ -0.24
RNF43-201ENST00000407977 ROBO2Q9HCK4 1378 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 TM9SF1O15321 606 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 FCGR1AP12314 374 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 KCNJ1P48048 391 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 SULT1E1P49888 294 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 ERVK-24P63145 666 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 HLFQ16534 295 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
RNF43-201ENST00000407977 SIK2Q9H0K1 926 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 MAP3K13O43283 966 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 TOMM70O94826 608 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 CEP78Q5JTW2 689 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.25
RNF43-201ENST00000407977 MRPS26Q9BYN8 205 aaKnown RBP13.52□□□□□ -0.25
RNF43-201ENST00000407977 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.25
RNF43-201ENST00000407977 NDUFS3O75489 264 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 OCM2P0CE71 109 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 OCMP0CE72 109 aaPredicted RBP13.51□□□□□ -0.25
RNF43-201ENST00000407977 GRK2P25098 689 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 CPA2P48052 419 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 TP53BP2Q13625 1128 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 CIAPIN1Q6FI81 312 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 ATPAF2Q8N5M1 289 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 KCNB2Q92953 911 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 SPON2Q9BUD6 331 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 ACAD9Q9H845 621 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 ATP5BP06576 529 aaKnown RBP13.51□□□□□ -0.25
RNF43-201ENST00000407977 FDPSP14324 419 aaKnown RBP13.51□□□□□ -0.25
RNF43-201ENST00000407977 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
RNF43-201ENST00000407977 SOX6P35712 828 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 RGS4P49798 205 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
RNF43-201ENST00000407977 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms