RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CACNA2D3Q8IZS8 1091 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC15A4Q8N697 577 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 BHLHE22Q8NFJ8 381 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 TFAP2CQ92754 450 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 PPP1R9BQ96SB3 815 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC38A3Q99624 504 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 MYOCQ99972 504 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 TMEM120AQ9BXJ8 343 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 STK31Q9BXU1 1019 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SEC61A2Q9H9S3 476 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 DACT1Q9NYF0 836 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 HDAC9Q9UKV0 1011 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 MAN2B2Q9Y2E5 1009 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 TOP2AP11388 1531 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 M0QYG6 137 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 FFAR3O14843 346 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 CCP110O43303 1012 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 IPO13O94829 963 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 PDIA3P30101 505 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 RPS19P39019 145 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 VIPR2P41587 438 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 POLE2P56282 527 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 PIGFQ07326 219 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 UBXN2BQ14CS0 331 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 PFKFB4Q16877 469 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 METTL24Q5JXM2 366 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 UTP14CQ5TAP6 766 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 EFCAB12Q6NXP0 572 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 DRICH1Q6PGQ1 229 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 FAM111BQ6SJ93 734 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 USP37Q86T82 979 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF384Q8TF68 577 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 CFHR4Q92496 578 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 DACT3Q96B18 629 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 SNX27Q96L92 541 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 HEPHQ9BQS7 1158 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 SPATA5L1Q9BVQ7 753 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 CHST8Q9H2A9 424 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 DHX36Q9H2U1 1008 aaKnown RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 GSTO2Q9H4Y5 243 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 PRDM16Q9HAZ2 1276 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 TMEM8AQ9HCN3 771 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 HEYLQ9NQ87 328 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 LRFN1Q9P244 771 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
HMGB3P18-201ENST00000406327 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 PRSS29PA6NIE9 313 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 DNAJB5O75953 348 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 DHRS4L1P0CG22 281 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 CR2P20023 1033 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ACVR2AP27037 513 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 DDIT3P35638 169 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 COPAP53621 1224 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 UCP3P55916 312 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ARL4CP56559 192 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 DUSP8Q13202 625 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 SPARCL1Q14515 664 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC29A2Q14542 456 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ACAP1Q15027 740 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 INSCQ1MX18 579 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 DCAF12L1Q5VU92 463 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ARHGEF18Q6ZSZ5 1173 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 KRT28Q7Z3Y7 464 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ADGRG2Q8IZP9 1017 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 VGLL2Q8N8G2 317 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC35B2Q8TB61 432 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 NEIL1Q96FI4 390 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF512Q96ME7 567 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 MS4A7Q9GZW8 240 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 XPR1Q9UBH6 696 aa5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 SMG5Q9UPR3 1016 aaKnown RBP5.59□□□□□ -1.51
HMGB3P18-201ENST00000406327 NCANO14594 1321 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 CDHR4A6H8M9 788 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 WNT10BO00744 389 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 NPC1O15118 1278 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 B4GALT4O60513 344 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 CDC14BO60729 498 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 MFAP3LO75121 409 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 AGFG2O95081 481 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 TSPAN15O95858 294 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 IL1R1P14778 569 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLC6A4P31645 630 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 SERPINF1P36955 418 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 MAPK9P45984 424 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 TCF15Q12870 199 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 PTK2BQ14289 1009 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 GGT6Q6P531 493 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 GATAD2AQ86YP4 633 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 LGI4Q8N135 537 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 ATG16L2Q8NAA4 619 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 DNERQ8NFT8 737 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM71BQ8TC56 605 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 NUP133Q8WUM0 1156 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 LRRC46Q96FV0 321 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 LMF1Q96S06 567 aa5.58□□□□□ -1.52
HMGB3P18-201ENST00000406327 MPHOSPH9Q99550 1183 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms