RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CD58P19256 250 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 GALCP54803 685 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 NAP1L1P55209 391 aaKnown RBP22.4■■□□□ 1.18
TPM1-208ENST00000404484 WDR5P61964 334 aaKnown RBP22.4■■□□□ 1.18
TPM1-208ENST00000404484 TUBB2AQ13885 445 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 SEPT8Q92599 483 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 CALR3Q96L12 384 aaKnown RBP22.4■■□□□ 1.18
TPM1-208ENST00000404484 TUBB2BQ9BVA1 445 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 POLIQ9UNA4 740 aa22.4■■□□□ 1.18
TPM1-208ENST00000404484 A0A0U1RQF3 1178 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 ANO9A1A5B4 782 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 WEE2P0C1S8 567 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 RABGGTBP53611 331 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 C9orf57Q5W0N0 161 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 DEFB123Q8N688 67 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 C18orf25Q96B23 403 aaPredicted RBP22.39■■□□□ 1.18
TPM1-208ENST00000404484 ACP6Q9NPH0 428 aa22.39■■□□□ 1.18
TPM1-208ENST00000404484 NCANO14594 1321 aa22.39■■□□□ 1.17
TPM1-208ENST00000404484 TMCO5BA8MYB1 307 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 THAP12O43422 761 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 PAEPP09466 180 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 DNAJB2P25686 324 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 DEFB103AP81534 67 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 CLEC16AQ2KHT3 1053 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 PHOSPHO2Q8TCD6 241 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 PCDHB18PQ96TA0 734 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 ADAM2Q99965 735 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 FTHL17Q9BXU8 183 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 MYO9BQ13459 2157 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 URI1O94763 535 aaPredicted RBP22.38■■□□□ 1.17
TPM1-208ENST00000404484 MOCS3O95396 460 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 FTLP02792 175 aaPredicted RBP22.38■■□□□ 1.17
TPM1-208ENST00000404484 TERF1P54274 439 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.38■■□□□ 1.17
TPM1-208ENST00000404484 TMCO2Q7Z6W1 182 aaPredicted RBP22.38■■□□□ 1.17
TPM1-208ENST00000404484 PALB2Q86YC2 1186 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 RFFLQ8WZ73 363 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 TRIM11Q96F44 468 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 PPP1R10Q96QC0 940 aaKnown RBP22.38■■□□□ 1.17
TPM1-208ENST00000404484 SLC9A7Q96T83 725 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 CXCL16Q9H2A7 254 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 SMYD3Q9H7B4 428 aa22.38■■□□□ 1.17
TPM1-208ENST00000404484 PUF60Q9UHX1 559 aaKnown RBP22.38■■□□□ 1.17
TPM1-208ENST00000404484 PIRO00625 290 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 MGEA5O60502 916 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 MYOGP15173 224 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 LRPAP1P30533 357 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 INCA1Q0VD86 236 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 SV2CQ496J9 727 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 ACAD10Q6JQN1 1059 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 RHOT2Q8IXI1 618 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 MMS19Q96T76 1030 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 DNAI2Q9GZS0 605 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
TPM1-208ENST00000404484 L2HGDHQ9H9P8 463 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 TAS2R14Q9NYV8 317 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 YBX2Q9Y2T7 364 aaKnown RBP22.37■■□□□ 1.17
TPM1-208ENST00000404484 JRKLQ9Y4A0 524 aa22.37■■□□□ 1.17
TPM1-208ENST00000404484 PTGESO14684 152 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 FANCGO15287 622 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 MED7O43513 233 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 EFCAB14O75071 495 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 THP07101 528 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 MLH1P40692 756 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 HERC6Q8IVU3 1022 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 TIFAQ96CG3 184 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 FAM161BQ96MY7 647 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 BARX2Q9UMQ3 279 aaPredicted RBP22.36■■□□□ 1.17
TPM1-208ENST00000404484 PCDHGC5Q9Y5F6 944 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 CAPN6Q9Y6Q1 641 aa22.36■■□□□ 1.17
TPM1-208ENST00000404484 BUB1O43683 1085 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 CILPO75339 1184 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 LSM8O95777 96 aaKnown RBP22.35■■□□□ 1.17
TPM1-208ENST00000404484 NOP2P46087 812 aaKnown RBP22.35■■□□□ 1.17
TPM1-208ENST00000404484 RAP1GAPP47736 663 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 TAF6P49848 677 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 GPC5P78333 572 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 TCEAL1Q15170 157 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 ZNF697Q5TEC3 545 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 AGMOQ6ZNB7 445 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 ZNF606Q8WXB4 792 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 APBB2Q92870 758 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 GAD1Q99259 594 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 SDCBP2Q9H190 292 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 RGS18Q9NS28 235 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 MSRAQ9UJ68 235 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 SALL4Q9UJQ4 1053 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 CEP83Q9Y592 693 aa22.35■■□□□ 1.17
TPM1-208ENST00000404484 CHD9Q3L8U1 2897 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.34■■□□□ 1.17
TPM1-208ENST00000404484 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 CYP1A1P04798 512 aaPredicted RBP22.34■■□□□ 1.17
TPM1-208ENST00000404484 MYBL1P10243 752 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 UNGP13051 313 aaPredicted RBP22.34■■□□□ 1.17
TPM1-208ENST00000404484 ABCB4P21439 1286 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 RAB30Q15771 203 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 ECHDC2Q86YB7 292 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 ZFP42Q96MM3 310 aa22.34■■□□□ 1.17
TPM1-208ENST00000404484 MTMR10Q9NXD2 777 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms