RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ITGAVP06756 1048 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ATF7P17544 494 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 VCPP55072 806 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 PIGHQ14442 188 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SETDB1Q15047 1291 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 KAZNQ674X7 775 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 MFSD7Q6UXD7 560 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 SPOCD1Q6ZMY3 1216 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 CENPUQ71F23 418 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ECHDC2Q86YB7 292 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 UBR7Q8N806 425 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 AGAP11Q8TF27 550 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 NKD2Q969F2 451 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 HAPLN2Q9GZV7 340 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 DHX33Q9H6R0 707 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 TMEM134Q9H6X4 195 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 NOP53Q9NZM5 478 aaKnown RBP11.34□□□□□ -0.59
CLIP4-204ENST00000404424 FETUBQ9UGM5 382 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 USH1CQ9Y6N9 552 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 ZNF541Q9H0D2 1346 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
CLIP4-204ENST00000404424 TCRBV5S1A1TA0A578 114 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 KRT10P13645 584 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PECAM1P16284 738 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 GLRA2P23416 452 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ARL2P36404 184 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 RPL7AP62424 266 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ATP11AP98196 1134 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 GPS1Q13098 491 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 GRM1Q13255 1194 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 NCOA4Q13772 614 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 OASLQ15646 514 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PDK4Q16654 411 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ATP13A4Q4VNC1 1196 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 RNASEH2BQ5TBB1 312 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 DNAJC24Q6P3W2 148 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 SEPT14Q6ZU15 432 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 NIPA2Q8N8Q9 360 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 FRMD8P1Q9BZ68 369 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PHTF1Q9UMS5 762 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 EFR3BQ9Y2G0 817 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ADGRA2Q96PE1 1338 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 hCG_1818297A0A087WSY0 165 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 LOC102724159A0A0B4J2E5 919 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 LRRIQ4A6NIV6 560 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 WFS1O76024 890 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ATG7O95352 703 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ANP32DO95626 131 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 KRT16P08779 473 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 KRT15P19012 456 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 BACE1P56817 501 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 SP4Q02446 784 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ADCY1Q08828 1119 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PWP2Q15269 919 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ZC3H12AQ5D1E8 599 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 DCUN1D2Q6PH85 259 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ZBTB45Q96K62 511 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PAIP2Q9BPZ3 127 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.33□□□□□ -0.6
CLIP4-204ENST00000404424 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 FER1L6Q2WGJ9 1857 aa11.33□□□□□ -0.6
CLIP4-204ENST00000404424 POC1B-GALNT4F8VUJ3 575 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 DCTN3O75935 186 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 OATP04181 439 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ALDH3A1P30838 453 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 CXCL9Q07325 125 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 MOGSQ13724 837 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SPDYAQ5MJ70 313 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 TMEM143Q96AN5 459 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 STAMBPL1Q96FJ0 436 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 WNK4Q96J92 1243 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 TARS2Q9BW92 718 aaKnown RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 VPS37BQ9H9H4 285 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms