RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 RAB21Q9UL25 225 aa9.17□□□□□ -0.94
LINC02449-202ENST00000399866 ST3GAL5Q9UNP4 418 aa9.17□□□□□ -0.94
LINC02449-202ENST00000399866 ALG6Q9Y672 507 aa9.17□□□□□ -0.94
LINC02449-202ENST00000399866 SCINQ9Y6U3 715 aa9.17□□□□□ -0.94
LINC02449-202ENST00000399866 CITO14578 2027 aa9.17□□□□□ -0.94
LINC02449-202ENST00000399866 TRIP12Q14669 1992 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 SPOPO43791 374 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CD4P01730 458 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 VDRP11473 427 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CTNNA1P35221 906 aaKnown RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 MARCKSL1P49006 195 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 NDST1P52848 882 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 PRMT2P55345 433 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 VSNL1P62760 191 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 SOX4Q06945 474 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 ARHGEF6Q15052 776 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 BRD3Q15059 726 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 C2CD6Q53TS8 623 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 FAM26DQ5JW98 314 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 C9orf57Q5W0N0 161 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 PLEKHA7Q6IQ23 1121 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CCDC70Q6NSX1 233 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 PHLDB2Q86SQ0 1253 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CPNE8Q86YQ8 564 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 HACE1Q8IYU2 909 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 ARRDC4Q8NCT1 418 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 ALG3Q92685 438 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 KRT35Q92764 455 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CD101Q93033 1021 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 TSEN34Q9BSV6 310 aaKnown RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 WNT8AQ9H1J5 351 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CARD9Q9H257 536 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 LHX5Q9H2C1 402 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 MRPL47Q9HD33 250 aaKnown RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 FAM105AQ9NUU6 356 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 RNF19AQ9NV58 838 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 TTC7AQ9ULT0 858 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 BARX2Q9UMQ3 279 aaPredicted RBP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC02449-202ENST00000399866 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CEP83Q9Y592 693 aa9.16□□□□□ -0.94
LINC02449-202ENST00000399866 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 M0QYV0 167 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 O00370 1275 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PIRO00625 290 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PTGESO14684 152 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 GPR182O15218 404 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 CAND2O75155 1236 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 MICAL2O94851 1124 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PROSCO94903 275 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 TUBBP07437 444 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 GHRP10912 638 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 ITGA4P13612 1032 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 CYP3A5P20815 502 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 CD52P31358 61 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 GRK4P32298 578 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 MAN1A1P33908 653 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PNPLA4P41247 253 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 RNASE9P60153 205 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 HTRA3P83110 453 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PAK2Q13177 524 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 MAMLD1Q13495 774 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 LPIN1Q14693 890 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 FBXO47Q5MNV8 452 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 LHX8Q68G74 356 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 C8orf74Q6P047 294 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 CC2D1AQ6P1N0 951 aaPredicted RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 WDR93Q6P2C0 686 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 DNAJC24Q6P3W2 148 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 TMCO3Q6UWJ1 677 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 WDTC1Q8N5D0 677 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 RUBCNQ92622 972 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 RNPC3Q96LT9 517 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PPP1R10Q96QC0 940 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 MRPL45Q9BRJ2 306 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 TRIM7Q9C029 511 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 AGO3Q9H9G7 860 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 TRMT13Q9NUP7 481 aaKnown RBP9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PARVAQ9NVD7 372 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 ZNF446Q9NWS9 450 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 TMEM59LQ9UK28 342 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 SNX9Q9Y5X1 595 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 PTCH2Q9Y6C5 1203 aa9.15□□□□□ -0.94
LINC02449-202ENST00000399866 MYH10P35580 1976 aa9.14□□□□□ -0.95
LINC02449-202ENST00000399866 A0A1W2PQ45 241 aaPredicted RBP9.14□□□□□ -0.95
LINC02449-202ENST00000399866 A0A1W2PQY0 241 aa9.14□□□□□ -0.95
LINC02449-202ENST00000399866 TCRBV5S1A1TA0A578 114 aa9.14□□□□□ -0.95
LINC02449-202ENST00000399866 CCDC66A2RUB6 948 aa9.14□□□□□ -0.95
LINC02449-202ENST00000399866 ERLIN1O75477 346 aa9.14□□□□□ -0.95
LINC02449-202ENST00000399866 SEC31AO94979 1220 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms