RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ARSJQ5FYB0 599 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ALS2CLQ60I27 953 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 GLIS2Q9BZE0 524 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 UBAP1Q9NZ09 502 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 APOL1O14791 398 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ROR1Q01973 937 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 C11orf57Q6ZUT1 292 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 SRLQ86TD4 932 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PDIK1LQ8N165 341 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 UBE2OQ9C0C9 1292 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 AMD1P17707 334 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PTH1RQ03431 593 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 C1orf146Q5VVC0 180 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 TBC1D16Q8TBP0 767 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 FANCLQ9NW38 375 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 F5H5T6 163 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ASAP2O43150 1006 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 FGFR2P21802 821 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ALDH6A1Q02252 535 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 COMMD2Q86X83 199 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 HNRNPLLQ8WVV9 542 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 CATSPERBQ9H7T0 1116 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 SERPINB10P48595 397 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 DR1Q01658 176 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 RBL2Q08999 1139 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 MAN2A1Q16706 1144 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 LPAR1Q92633 364 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 MED15Q96RN5 788 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ZFP69BQ9UJL9 534 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 USP42Q9H9J4 1324 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 A0A0G2JND7 137 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ITGAXP20702 1163 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 TMPRSS15P98073 1019 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 ICA1LQ8NDH6 482 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 IPCEF1Q8WWN9 437 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
CACNA1C-210ENST00000399606 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 COPEO14579 308 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 CHGBP05060 677 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 VAMP7P51809 220 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 FKBP3Q00688 224 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 AMHR2Q16671 573 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 NEK9Q8TD19 979 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 FAR2Q96K12 515 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 CERS4Q9HA82 394 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 PDZK1P1A8MUH7 402 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 CASP14P31944 242 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 EIF3BP55884 814 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 CEP55Q53EZ4 464 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 KRT39Q6A163 491 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 MTSS1LQ765P7 747 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 AGR3Q8TD06 166 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 TTC17Q96AE7 1141 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 DHTKD1Q96HY7 919 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 STK33Q9BYT3 514 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 NR1D1P20393 614 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 TGFB2P61812 414 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms