RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 ZNF461Q8TAF7 563 aa18.79■□□□□ 0.6
SMIM11A-202ENST00000399295 PLEKHO2Q8TD55 490 aa18.79■□□□□ 0.6
SMIM11A-202ENST00000399295 ZNF516Q92618 1163 aa18.79■□□□□ 0.6
SMIM11A-202ENST00000399295 PPP1R9BQ96SB3 815 aa18.79■□□□□ 0.6
SMIM11A-202ENST00000399295 TSG101Q99816 390 aa18.79■□□□□ 0.6
SMIM11A-202ENST00000399295 MTCL1Q9Y4B5 1905 aaKnown RBP18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 WDR27A2RRH5 827 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 OR6C75A6NL08 312 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 LRRIQ3A6PVS8 624 aaPredicted RBP18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 MAPK13O15264 365 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 AKAP3O75969 853 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 ABLIM3O94929 683 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 ADCY5O95622 1261 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 C8AP07357 584 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 CPB1P15086 417 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 PSMC2P35998 433 aaKnown RBP18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 AP3M2P53677 418 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 CLDN10P78369 228 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 WSCD1Q658N2 575 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 C15orf39Q6ZRI6 1047 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 RTL10Q7L3V2 364 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 TMC2Q8TDI7 906 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 HPDLQ96IR7 371 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 PHF7Q9BWX1 381 aaPredicted RBP18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 FANCLQ9NW38 375 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 ZDHHC7Q9NXF8 308 aa18.78■□□□□ 0.6
SMIM11A-202ENST00000399295 CETN3O15182 167 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 HUS1O60921 280 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 PHACTR2O75167 634 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 CST3P01034 146 aaPredicted RBP18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 ELF1P32519 619 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 STX17P56962 302 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 ZP2Q05996 745 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 PPM1LQ5SGD2 360 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 TPGS2Q68CL5 300 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 GJD3Q8N144 294 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 THEM5Q8N1Q8 247 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 SLC7A14Q8TBB6 771 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 FEZF2Q8TBJ5 459 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 PDLIM2Q96JY6 352 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 MED15Q96RN5 788 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 PRKD2Q9BZL6 878 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 GDAP2Q9NXN4 497 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
SMIM11A-202ENST00000399295 PLXNA3P51805 1871 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 C19orf67A6NJJ6 358 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 KRT13P13646 458 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ATF2P15336 505 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ZNF18P17022 549 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 SSTR3P32745 418 aaPredicted RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 VAMP7P51809 220 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 PMS1P54277 932 aaKnown RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 DLG4P78352 724 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 BIRC3Q13489 604 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 TRPC3Q13507 836 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ANKRD40Q6AI12 368 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 CCDC149Q6ZUS6 474 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 INTS8Q75QN2 995 aaKnown RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ANKRD20A12PQ8NF67 263 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 SMG7Q92540 1137 aaKnown RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 ZNF707Q96C28 371 aaPredicted RBP18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 EEF2KMTQ96G04 330 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 HSD3B7Q9H2F3 369 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 POMKQ9H5K3 350 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 THAP9Q9H5L6 903 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 PIDD1Q9HB75 910 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 SCN1AP35498 2009 aa18.76■□□□□ 0.59
SMIM11A-202ENST00000399295 C5orf42Q9H799 3197 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 BDP1A6H8Y1 2624 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 PRRG1O14668 218 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 PAPLNO95428 1278 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 C4BPAP04003 597 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 HNRNPA1P09651 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 OR4Q2P0C623 313 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 ZNF75DP51815 510 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 FKBP3Q00688 224 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 GPR17Q13304 367 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 CDKAL1Q5VV42 579 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 TTI2Q6NXR4 508 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 RNF19BQ6ZMZ0 732 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 FAM114A1Q8IWE2 563 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 TOP6BLQ8N6T0 577 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 MRFAP1L1Q96HT8 127 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 RPGRIP1Q96KN7 1286 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 CYP4F11Q9HBI6 524 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 CD320Q9NPF0 282 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 AFF4Q9UHB7 1163 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 MAFFQ9ULX9 164 aa18.75■□□□□ 0.59
SMIM11A-202ENST00000399295 L1RE1Q9UN81 338 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms