RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RBM41Q96IZ5 413 aaKnown RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 CGRRF1Q99675 332 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 PIGRP01833 764 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 ALDH5A1P51649 535 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-203ENST00000398969 MGAT5Q09328 741 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 C12orf42Q96LP6 360 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 EXOC1LA0A1B0GW35 172 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 C19orf81C9J6K1 198 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 MMP8P22894 467 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 WDR4P57081 412 aaKnown RBP27.04■■□□□ 1.92
COL13A1-203ENST00000398969 IL9RQ01113 521 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 EAPPQ56P03 285 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-203ENST00000398969 RNF43Q68DV7 783 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 SLFN12LQ6IEE8 588 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 DRICH1Q6PGQ1 229 aaPredicted RBP27.04■■□□□ 1.92
COL13A1-203ENST00000398969 REPS2Q8NFH8 660 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 OR5B17Q8NGF7 314 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 KCNN1Q92952 543 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 KLHL29Q96CT2 875 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 MSTO1Q9BUK6 570 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 KLHL14Q9P2G3 628 aa27.04■■□□□ 1.92
COL13A1-203ENST00000398969 TMEM191CA6NGB0 347 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 TMEM191BP0C7N4 346 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 ZSCAN5DPP0CG00 497 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 MFSD7Q6UXD7 560 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 TRABD2AQ86V40 505 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 GRAMD1AQ96CP6 724 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 CDHR1Q96JP9 859 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 ANKFY1Q9P2R3 1169 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 ZNF148Q9UQR1 794 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 PHIPQ8WWQ0 1821 aa27.03■■□□□ 1.92
COL13A1-203ENST00000398969 KRT1P04264 644 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 SUPT20HL2P0C7V6 817 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ALADP13716 330 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ATF7P17544 494 aaPredicted RBP27.02■■□□□ 1.92
COL13A1-203ENST00000398969 GLRA2P23416 452 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 NR1H3Q13133 447 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ACVR2BQ13705 512 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ALLCQ8N6M5 410 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ZNF606Q8WXB4 792 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ARHGEF3Q9NR81 526 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.02■■□□□ 1.92
COL13A1-203ENST00000398969 TJP3O95049 919 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 LDHAP00338 332 aaKnown RBP27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ARSEP51690 589 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ZNF132P52740 706 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ZNF252P-AS1Q0IIN9 211 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 NOL9Q5SY16 702 aaKnown RBP27.02■■□□□ 1.92
COL13A1-203ENST00000398969 ZFYVE27Q5T4F4 411 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 DEPTORQ8TB45 409 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 TTC25Q96NG3 672 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 TARS2Q9BW92 718 aaKnown RBP27.02■■□□□ 1.92
COL13A1-203ENST00000398969 PORCNQ9H237 461 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 CNTNAP2Q9UHC6 1331 aa27.02■■□□□ 1.92
COL13A1-203ENST00000398969 LRRIQ4A6NIV6 560 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 K7ERI5 159 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 PECAM1P16284 738 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ATP4AP20648 1035 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 NAMPTP43490 491 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ASRGL1Q7L266 308 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ECHDC2Q86YB7 292 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 TDRPQ86YL5 185 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 KIF2BQ8N4N8 673 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 PITPNM3Q9BZ71 974 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 IVNS1ABPQ9Y6Y0 642 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 COL11A1P12107 1806 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-203ENST00000398969 SIP14410 1827 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 A0A0B4J269 797 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 SPATA31C2B4DYI2 1134 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ASMTLO95671 621 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ETS1P14921 441 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 MCL1Q07820 350 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 NCOA4Q13772 614 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 PRKG1Q13976 671 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 SCARA3Q6AZY7 606 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 ANKLE1Q8NAG6 615 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.01■■□□□ 1.91
COL13A1-203ENST00000398969 UBN1Q9NPG3 1134 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 FBXO40Q9UH90 709 aa27.01■■□□□ 1.91
COL13A1-203ENST00000398969 SPAG7O75391 227 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 KRT16P08779 473 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 ELF1P32519 619 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 GPS1Q13098 491 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 FASTKD3Q14CZ7 662 aaKnown RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 CCDC142Q17RM4 750 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 SPOCD1Q6ZMY3 1216 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 FAM47EQ6ZV65 393 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 UBR7Q8N806 425 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 RNF181Q9P0P0 153 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 RLFQ13129 1914 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 ADGRA2Q96PE1 1338 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 USP2O75604 605 aaPredicted RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 EDN1P05305 212 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 LRRC38Q5VT99 294 aa27■■□□□ 1.91
COL13A1-203ENST00000398969 PAIP2Q9BPZ3 127 aaKnown RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 DHX33Q9H6R0 707 aaKnown RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 ADARB2Q9NS39 739 aaKnown RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 ZNF214Q9UL59 606 aaPredicted RBP27■■□□□ 1.91
COL13A1-203ENST00000398969 TCRBV5S1A1TA0A578 114 aa26.99■■□□□ 1.91
COL13A1-203ENST00000398969 CCDC15Q0P6D6 951 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms