RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SPATA21Q7Z572 469 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 RSPH1Q8WYR4 309 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 EME1Q96AY2 570 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 STARD7Q9NQZ5 370 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 IGF2BP3O00425 579 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATL3-201ENST00000398868 PMPCBO75439 489 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 EGFRP00533 1210 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CKMP06732 381 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CAPN1P07384 714 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 SERPINB10P48595 397 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 RAD51Q06609 339 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CCDC149Q6ZUS6 474 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ATPAF2Q8N5M1 289 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 DNAJC9Q8WXX5 260 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 KLF6Q99612 283 aaPredicted RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 EPAS1Q99814 870 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 PIF1Q9H611 641 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ZFYVE1Q9HBF4 777 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 STMN3Q9NZ72 180 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ACADMP11310 421 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CYLC2Q14093 348 aaPredicted RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 SLC15A2Q16348 729 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 IYDQ6PHW0 289 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 VN1R5Q7Z5H4 357 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 STAMBPL1Q96FJ0 436 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 PKD2L2Q9NZM6 624 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CD274Q9NZQ7 290 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 TECPR2O15040 1411 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 RGS5O15539 181 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 PARNO95453 639 aaKnown RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 RAG1P15918 1043 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 NFKBIAP25963 317 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 CYP2C19P33261 490 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 MDH1P40925 334 aaKnown RBP9.77□□□□□ -0.85
ATL3-201ENST00000398868 TRIM16LQ309B1 348 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 MOB2Q70IA6 237 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 MDM1Q8TC05 714 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 TMEM169Q96HH4 297 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 SMARCAD1Q9H4L7 1026 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 NUDT5Q9UKK9 219 aa9.77□□□□□ -0.85
ATL3-201ENST00000398868 ATP1A4Q13733 1029 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 NECTIN1Q15223 517 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 PALB2Q86YC2 1186 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 C20orf96Q9NUD7 363 aaPredicted RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 STRIP1Q5VSL9 837 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 OR9Q1Q8NGQ5 310 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 SGF29Q96ES7 293 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 RNF208Q9H0X6 261 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 TAF1DQ9H5J8 278 aaPredicted RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 UBP1Q9NZI7 540 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 CFAP74Q9C0B2 1584 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 TRAPPC3O43617 180 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 PDHBP11177 359 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 ARL4CP56559 192 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 NAALADL2Q58DX5 795 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 DHX40Q8IX18 779 aaKnown RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 ZNF555Q8NEP9 628 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 RELTQ969Z4 430 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 TARS2Q9BW92 718 aaKnown RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 SETD4Q9NVD3 440 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 NFKBIL1Q9UBC1 381 aaPredicted RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 MAD2L2Q9UI95 211 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 KRT37O76014 449 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 NR3C2P08235 984 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 CHRM3P20309 590 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 HARS2P49590 506 aaKnown RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 CPT1AP50416 773 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 TRIP10Q15642 601 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 DOK6Q6PKX4 331 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 C4orf33Q8N1A6 199 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 OSMRQ99650 979 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 KCNF1Q9H3M0 494 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 NMRK2Q9NPI5 230 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 UTP6Q9NYH9 597 aaKnown RBP9.76□□□□□ -0.85
ATL3-201ENST00000398868 POLLQ9UGP5 575 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 PDGFRAP16234 1089 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 IL10P22301 178 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 KLRC2P26717 231 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 TYK2P29597 1187 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 HMOX2P30519 316 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 FUT11Q495W5 492 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 BLOC1S5Q8TDH9 187 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 SEL1LQ9UBV2 794 aa9.76□□□□□ -0.85
ATL3-201ENST00000398868 EEF2KO00418 725 aaKnown RBP9.75□□□□□ -0.85
ATL3-201ENST00000398868 SPATA31D3P0C874 917 aa9.75□□□□□ -0.85
ATL3-201ENST00000398868 PAX7P23759 505 aa9.75□□□□□ -0.85
ATL3-201ENST00000398868 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
ATL3-201ENST00000398868 CCL23P55773 120 aa9.75□□□□□ -0.85
ATL3-201ENST00000398868 PTRHD1Q6GMV3 140 aaKnown RBP9.75□□□□□ -0.85
ATL3-201ENST00000398868 SPATA31D4Q6ZUB0 917 aa9.75□□□□□ -0.85
ATL3-201ENST00000398868 C16orf59Q7L2K0 433 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms