RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 AP3B2Q13367 1082 aa9.78□□□□□ -0.84
CDH23-203ENST00000398788 TRIM16LQ309B1 348 aa9.78□□□□□ -0.84
CDH23-203ENST00000398788 CENPOQ9BU64 300 aa9.78□□□□□ -0.84
CDH23-203ENST00000398788 TRIM9Q9C026 710 aa9.78□□□□□ -0.84
CDH23-203ENST00000398788 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
CDH23-203ENST00000398788 HERC5Q9UII4 1024 aaKnown RBP9.78□□□□□ -0.84
CDH23-203ENST00000398788 GPR75-ASB3A0A0A6YYF3 556 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 USP1O94782 785 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 PENKP01210 267 aaPredicted RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 MT-ND3P03897 115 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 KLRK1P26718 216 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 MMP13P45452 471 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 PRELPP51888 382 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 ATP2C1P98194 919 aaPredicted RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 ITSN1Q15811 1721 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 MAPK6Q16659 721 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 GSTA3Q16772 222 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 NT5DC1Q5TFE4 455 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 C14orf80Q86SX3 495 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 ECHDC2Q86YB7 292 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 RHPN2Q8IUC4 686 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 OSBPL10Q9BXB5 764 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 STK36Q9NRP7 1315 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 TRNAU1APQ9NX07 287 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 CTNNAL1Q9UBT7 734 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 CARD8Q9Y2G2 431 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 HBS1LQ9Y450 684 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 ASB3Q9Y575 518 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 A0A087X0B3 334 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 FAM47DPA6NHR8 397 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 FTLP02792 175 aaPredicted RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 PAEPP09466 180 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 PSMA2P25787 234 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 QARSP47897 775 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 KCNJ1P48048 391 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 TOB1P50616 345 aaPredicted RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 NEK3P51956 506 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 RFWD3Q6PCD5 774 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 LDHDQ86WU2 507 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 DGCR14Q96DF8 476 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 PGM2Q96G03 612 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 C9orf72Q96LT7 481 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 KLHL4Q9C0H6 718 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 SH3GLB2Q9NR46 395 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 GMEB1Q9Y692 573 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 SALL1Q9NSC2 1324 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 A0A087X0T9 212 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 ZNF263O14978 683 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 TOM1L1O75674 476 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 GH1P01241 217 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 FAM228BP0C875 321 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 STXBP2Q15833 593 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 PARP6Q2NL67 630 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 TMTC4Q5T4D3 741 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 STYK1Q6J9G0 422 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 CCDC137Q6PK04 289 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 PRPF18Q99633 342 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 COQ7Q99807 217 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 EIF2AK1Q9BQI3 630 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 NUP85Q9BW27 656 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 MRPL46Q9H2W6 279 aaKnown RBP9.77□□□□□ -0.85
CDH23-203ENST00000398788 ZNF212Q9UDV6 495 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 WASF2Q9Y6W5 498 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 LTBP4Q8N2S1 1624 aa9.77□□□□□ -0.85
CDH23-203ENST00000398788 MAP1BP46821 2468 aaKnown RBP9.76□□□□□ -0.85
CDH23-203ENST00000398788 A0A0J9YVX5 310 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 PVALEFA0A1B0GWK0 134 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 GOLGA8RI6L899 631 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 PIK3R2O00459 728 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 OR6B1O95007 311 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 ZBED1O96006 694 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 S100A1P23297 94 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 AP1B1Q10567 949 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 MEA1Q16626 185 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 ZNF568Q3ZCX4 644 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 SYCP2LQ5T4T6 812 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 DSTYKQ6XUX3 929 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 PDIK1LQ8N165 341 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 SIX6OS1Q8N1H7 587 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 C1orf131Q8NDD1 294 aaKnown RBP9.76□□□□□ -0.85
CDH23-203ENST00000398788 PYROXD1Q8WU10 500 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 INPP5DQ92835 1189 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 CFAP36Q96G28 342 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.76□□□□□ -0.85
CDH23-203ENST00000398788 PI4K2BG5E9Z4 385 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 PODXLO00592 558 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 NDUFB10O96000 172 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 CIITAP33076 1130 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 USP11P51784 963 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 LMNB2Q03252 620 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 SLC18A3Q16572 532 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 MEI1Q5TIA1 1274 aa9.76□□□□□ -0.85
CDH23-203ENST00000398788 GUF1Q8N442 669 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms