RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PIK3CDO00329 1044 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 PDK1Q15118 436 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 SPATA21Q7Z572 469 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 RIBC1Q8N443 379 aaPredicted RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 MIPOL1Q8TD10 442 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 PABPC3Q9H361 631 aaKnown RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 DFFAO00273 331 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 LMNAP02545 664 aaKnown RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 STIP1P31948 543 aaKnown RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 HSD17B3P37058 310 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 SH3BGRP55822 239 aaPredicted RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 DRP2Q13474 957 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 ZNF235Q14590 738 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 SLC20A1Q8WUM9 679 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 KRT35Q92764 455 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 ETNK1Q9HBU6 452 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 NOP53Q9NZM5 478 aaKnown RBP14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 ARL2BPQ9Y2Y0 163 aa14.92□□□□□ -0.02
PCDHGA11-201ENST00000398587 FAM47DPA6NHR8 397 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CHUKO15111 745 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 PSMD3O43242 534 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ZWINTO95229 277 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 LSP1P33241 339 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 SERPINB9P50453 376 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 IRAK1P51617 712 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 SLC12A1Q13621 1099 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ANKRD20A4Q4UJ75 823 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ANKRD20A8PQ5CZ79 823 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ANKRD20A2Q5SQ80 823 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ANKRD20A1Q5TYW2 823 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CYFIP2Q96F07 1278 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 TRPV6Q9H1D0 765 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 TJP2Q9UDY2 1190 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 TRIM33Q9UPN9 1127 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CFAP73A6NFT4 308 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 MEFVO15553 781 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 EPHX2P34913 555 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ZNF200P98182 395 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 TAF11Q15544 211 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 DCAF6Q58WW2 860 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 ZNF473Q8WTR7 871 aaKnown RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 BTBD6Q96KE9 485 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 MED1Q15648 1581 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 EEF2KO00418 725 aaKnown RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 TADA2AO75478 443 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 LSM8O95777 96 aaKnown RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 SLC47A2Q86VL8 602 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 AGAP3Q96P47 875 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 PRMT1Q99873 361 aaKnown RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CHMP2BQ9UQN3 213 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CCDC195A0A1B0GUA6 201 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 PROSCO94903 275 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 CASP2P42575 452 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 RNF219Q5W0B1 726 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 C1orf186Q6ZWK4 172 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 PPIL6Q8IXY8 311 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 UPF3AQ9H1J1 476 aaKnown RBP14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 SUN2Q9UH99 717 aa14.91□□□□□ -0.02
PCDHGA11-201ENST00000398587 GOLGA8RI6L899 631 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 MAP3K7O43318 606 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 CCDC22O60826 627 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 FAM200BP0CF97 657 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 STAG3L1P0CL83 205 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 KITP10721 976 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 C11orf63Q6NUN7 778 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 C3orf62Q6ZUJ4 267 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 FRMD8P1Q9BZ68 369 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 CYP3A43Q9HB55 503 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 CISHQ9NSE2 258 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 CLGNO14967 610 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 PSMD10O75832 226 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 MYL6P60660 151 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 GCNT1Q02742 428 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 EVX2Q03828 476 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 MCL1Q07820 350 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 ASAP3Q8TDY4 903 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 HAUS8Q9BT25 410 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 WWP1Q9H0M0 922 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 DIAPH2O60879 1101 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 PLA2G4AP47712 749 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 SOX10P56693 466 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 LAMTOR4Q0VGL1 99 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 C2CD6Q53TS8 623 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 RASIP1Q5U651 963 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 DNAJC19Q96DA6 116 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 A1CFQ9NQ94 594 aaKnown RBP14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 KCND1Q9NSA2 647 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 SIK3Q9Y2K2 1263 aa14.9□□□□□ -0.02
PCDHGA11-201ENST00000398587 C17orf102A2RUQ5 167 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 PJA2O43164 708 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 MTSS1O43312 755 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms