RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 RIMBP2O15034 1052 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 PSTPIP1O43586 416 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 CCDC22O60826 627 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 TPPPO94811 219 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 ZWINTO95229 277 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 CFBP00751 764 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 CALCAP01258 141 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 TROVE2P10155 538 aaKnown RBP eCLIP8.71□□□□□ -1.01
TCF4-203ENST00000398339 MYBL1P10243 752 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 ARP10275 920 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 TAS2R40P59535 323 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 UBXN2AP68543 259 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 FASTKD3Q14CZ7 662 aaKnown RBP8.71□□□□□ -1.01
TCF4-203ENST00000398339 RASA2Q15283 850 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 RCN1Q15293 331 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 MAPK6Q16659 721 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 CEP55Q53EZ4 464 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 CBWD2Q8IUF1 395 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 RHOT1Q8IXI2 618 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 KATNAL2Q8IYT4 538 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 PTCD3Q96EY7 689 aaKnown RBP8.71□□□□□ -1.01
TCF4-203ENST00000398339 BTBD10Q9BSF8 475 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 TUBB6Q9BUF5 446 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 MAK16Q9BXY0 300 aaKnown RBP8.71□□□□□ -1.01
TCF4-203ENST00000398339 COA1Q9GZY4 146 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 VPS37BQ9H9H4 285 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 TMEM8AQ9HCN3 771 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 ANKFY1Q9P2R3 1169 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 UMODL1Q5DID0 1318 aa8.71□□□□□ -1.01
TCF4-203ENST00000398339 RBBP6Q7Z6E9 1792 aaKnown RBP8.71□□□□□ -1.01
TCF4-203ENST00000398339 KRT36O76013 467 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 VDRP11473 427 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 SKIP12755 728 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 KRT5P13647 590 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 SNRPFP62306 86 aaKnown RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 GTF2BQ00403 316 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 RCN2Q14257 317 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 ACSBG2Q5FVE4 666 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 HP1BP3Q5SSJ5 553 aaPredicted RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 RNF220Q5VTB9 566 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 LLGL2Q6P1M3 1020 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 HHIPL2Q6UWX4 724 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 TMEM179Q6ZVK1 233 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 HAUS6Q7Z4H7 955 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 GLIS1Q8NBF1 620 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 RFWD2Q8NHY2 731 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 MIPOL1Q8TD10 442 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 TAS1R2Q8TE23 839 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 SCG3Q8WXD2 468 aaKnown RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 CCDC127Q96BQ5 260 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 TRIM4Q9C037 500 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 PPCSQ9HAB8 311 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 SSU72Q9NP77 194 aaKnown RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 KCNQ5Q9NR82 932 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 ARL8BQ9NVJ2 186 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 PSMC3IPQ9P2W1 217 aaPredicted RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 SLC24A2Q9UI40 661 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 SCOCQ9UIL1 159 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 BARX2Q9UMQ3 279 aaPredicted RBP8.71□□□□□ -1.02
TCF4-203ENST00000398339 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
TCF4-203ENST00000398339 MYPNQ86TC9 1320 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 DDTLA6NHG4 134 aaPredicted RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 ALOX15BO15296 676 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 GSC2O15499 205 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 LIASO43766 372 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 ATP9AO75110 1047 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 ZBED4O75132 1171 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 HAUS5O94927 633 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 GSTA2P09210 222 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 POLR2MP0CAP2 368 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 ZSCAN5DPP0CG00 497 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 SLC34A1Q06495 639 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 KPNB1Q14974 876 aaKnown RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 SNRNP35Q16560 246 aaKnown RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 LRRC74BQ6ZQY2 392 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 FBXL13Q8NEE6 735 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 EXD1Q8NHP7 514 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 CPA5Q8WXQ8 436 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 ELMO3Q96BJ8 720 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 MRRFQ96E11 262 aaKnown RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 NSL1Q96IY1 281 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 TRAPPC9Q96Q05 1148 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 RAB20Q9NX57 234 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 DCTN4Q9UJW0 460 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 CCNL1Q9UK58 526 aaPredicted RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
TCF4-203ENST00000398339 GDF11O95390 407 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 PSMG1O95456 288 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 KRT4P19013 534 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 CD58P19256 250 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 ADRA1DP25100 572 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 CACNB3P54284 484 aa8.7□□□□□ -1.02
TCF4-203ENST00000398339 TCP10Q12799 353 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms