RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PGM5Q15124 567 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 KYNUQ16719 465 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SGO2Q562F6 1265 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SYCP2LQ5T4T6 812 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 C6orf118Q5T5N4 469 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 MFSD4BQ5TF39 518 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 LHX8Q68G74 356 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 RNF207Q6ZRF8 634 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SV2AQ7L0J3 742 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 CDR2LQ86X02 465 aaPredicted RBP5.31□□□□□ -1.56
SSR1-202ENST00000397511 VSIG1Q86XK7 387 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 CCNJLQ8IV13 435 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 RHOT2Q8IXI1 618 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 TMEM130Q8N3G9 435 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 FITM2Q8N6M3 262 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SMYD1Q8NB12 490 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 PPFIBP2Q8ND30 876 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
SSR1-202ENST00000397511 TMEM143Q96AN5 459 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 ATG4CQ96DT6 458 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 RMDN2Q96LZ7 410 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 NAP1L3Q99457 506 aaPredicted RBP5.31□□□□□ -1.56
SSR1-202ENST00000397511 C11orf70Q9BRQ4 267 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SYT11Q9BT88 431 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 LRMDAQ9H2I8 198 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 TMEM206Q9H813 350 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 FGFR1OP2Q9NVK5 253 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 GRHL1Q9NZI5 618 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SPATA7Q9P0W8 599 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SEL1LQ9UBV2 794 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 SUN2Q9UH99 717 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 TTC7AQ9ULT0 858 aaPredicted RBP5.31□□□□□ -1.56
SSR1-202ENST00000397511 TBX20Q9UMR3 447 aa5.31□□□□□ -1.56
SSR1-202ENST00000397511 MROH7Q68CQ1 1323 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 GREB1LQ9C091 1923 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 TCP11X1B4DZS4 312 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PHF2O75151 1096 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 GH1P01241 217 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 ICAM1P05362 532 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 HNRNPCP07910 306 aaKnown RBP eCLIP5.3□□□□□ -1.561e-9■■□□□ 12.1
SSR1-202ENST00000397511 ASNSP08243 561 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 NUDT17P0C025 328 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 RASSF2P50749 326 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PSMD7P51665 324 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 OCRLQ01968 901 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 KRT17Q04695 432 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 CALCOCO2Q13137 446 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SLC15A2Q16348 729 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 GSTA3Q16772 222 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 KRT39Q6A163 491 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 CYP4F22Q6NT55 531 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 C9orf72Q96LT7 481 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 OLFM3Q96PB7 478 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 HAPLN3Q96S86 360 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 TSPYL2Q9H2G4 693 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 ADAM7Q9H2U9 754 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PABPC3Q9H361 631 aaKnown RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 C10orf88Q9H8K7 445 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 RAB20Q9NX57 234 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 TUBGCP4Q9UGJ1 667 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 RASAL2Q9UJF2 1139 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 NOCTQ9UK39 431 aaKnown RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 CHMP2BQ9UQN3 213 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 R3HDM2Q9Y2K5 976 aaKnown RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 GJA3Q9Y6H8 435 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SYNGAP1Q96PV0 1343 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 hCG_2014768A0A024R1R8 64 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 GSTTP1A0A1W2PQM5 241 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 ZNF862O60290 1169 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 KRT10P13645 584 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 ATF7P17544 494 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 PAX3P23760 479 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 RXRBP28702 533 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 ADCY8P40145 1251 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PTGIRP43119 386 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 MFAP3P55082 362 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SESN3P58005 492 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 OSTNP61366 133 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 CNGA2Q16280 664 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 KBTBD12Q3ZCT8 623 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 RNF43Q68DV7 783 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SLC39A4Q6P5W5 647 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 TMEM270Q6UE05 265 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 GSTA5Q7RTV2 222 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 NLRX1Q86UT6 975 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SLC13A5Q86YT5 568 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 FBXL13Q8NEE6 735 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 INPP5DQ92835 1189 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 UTP4Q969X6 686 aaKnown RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 LENG1Q96BZ8 264 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 CLMNQ96JQ2 1002 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 NT5C1BQ96P26 610 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 CDC42EP4Q9H3Q1 356 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms