RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 EFCAB14O75071 495 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 DGKIO75912 1065 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 IPO7O95373 1038 aaKnown RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 PDGFRBP09619 1106 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 CD19P15391 556 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 BRD2P25440 801 aaKnown RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 ZNF132P52740 706 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 WSCD1Q658N2 575 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 DCLRE1AQ6PJP8 1040 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 ADGRF2Q8IZF7 708 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 PDCL2Q8N4E4 241 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 LNX1Q8TBB1 728 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 ATRIPQ8WXE1 791 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 MRPL9Q9BYD2 267 aaKnown RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 TFR2Q9UP52 801 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 PPP2R2CQ9Y2T4 447 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 ADGRG1Q9Y653 693 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 DDX3XO00571 662 aaKnown RBP eCLIP22.6■■□□□ 1.211e-13■■■□□ 15.3
CPNE1-204ENST00000397443 BAIAP3O94812 1187 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 RAD23BP54727 409 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 BPIFB4P59827 614 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 SPA17Q15506 151 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 PALB2Q86YC2 1186 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 LRRC43Q8N309 656 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 KBTBD7Q8WVZ9 684 aa22.6■■□□□ 1.21
CPNE1-204ENST00000397443 CXXC1Q9P0U4 656 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-204ENST00000397443 REXO2Q9Y3B8 237 aaKnown RBP22.6■■□□□ 1.21
CPNE1-204ENST00000397443 ESPNB1AK53 854 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 EIF3CLB5ME19 914 aaKnown RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 CCDC175P0C221 793 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 CHRNB2P17787 502 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 CDR1P51861 262 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 BCAR1P56945 870 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 SLC18A3Q16572 532 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 TMEM240Q5SV17 173 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 CD300LGQ6UXG3 332 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 EIF3CQ99613 913 aaKnown RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 LBHD1Q9BQE6 289 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 PDCL3Q9H2J4 239 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 SNX25Q9H3E2 840 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 NME7Q9Y5B8 376 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 A8MXQ7 604 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 NRP1O14786 923 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 CFHP08603 1231 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 LMO2P25791 158 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 INCA1Q0VD86 236 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 SPOUT1Q5T280 376 aaKnown RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 PASD1Q8IV76 773 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 TNS4Q8IZW8 715 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 SLC4A11Q8NBS3 891 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 OLIG1Q8TAK6 271 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 DDX1Q92499 740 aaKnown RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 TMEM176AQ96HP8 235 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 HEXIM2Q96MH2 286 aaKnown RBP22.59■■□□□ 1.21
CPNE1-204ENST00000397443 SYT11Q9BT88 431 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 NT5C1AQ9BXI3 368 aa22.59■■□□□ 1.21
CPNE1-204ENST00000397443 GNL1P36915 607 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-204ENST00000397443 SLC11A1P49279 550 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 FMO1Q01740 532 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 CDR2Q01850 454 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 BMS1Q14692 1282 aaKnown RBP22.58■■□□□ 1.21
CPNE1-204ENST00000397443 ACOT1Q86TX2 421 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 CCAR2Q8N163 923 aaKnown RBP22.58■■□□□ 1.21
CPNE1-204ENST00000397443 TOP6BLQ8N6T0 577 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 TFAP2BQ92481 460 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 PCDHB18PQ96TA0 734 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 LPIN3Q9BQK8 851 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 DPEP3Q9H4B8 488 aa22.58■■□□□ 1.21
CPNE1-204ENST00000397443 TADA2AO75478 443 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ALDH2P05091 517 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 CCDC122Q5T0U0 273 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 PSRC1Q6PGN9 363 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-204ENST00000397443 OSTM1Q86WC4 334 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 C12orf29Q8N999 325 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 RSPH1Q8WYR4 309 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 YME1L1Q96TA2 773 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ZSWIM1Q9BR11 485 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 TAS2R14Q9NYV8 317 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 FAN1Q9Y2M0 1017 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 TACC1O75410 805 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ACAT1P24752 427 aaKnown RBP22.57■■□□□ 1.2
CPNE1-204ENST00000397443 AARSP49588 968 aaKnown RBP eCLIP22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ALKBH5Q6P6C2 394 aaKnown RBP22.57■■□□□ 1.2
CPNE1-204ENST00000397443 KIAA1328Q86T90 577 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ZNF606Q8WXB4 792 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 NAGPAQ9UK23 515 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 PCDHA13Q9Y5I0 950 aa22.57■■□□□ 1.2
CPNE1-204ENST00000397443 ODC1P11926 461 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 KRT83P78385 493 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 BTG3Q14201 252 aaPredicted RBP22.56■■□□□ 1.2
CPNE1-204ENST00000397443 SLC30A5Q8TAD4 765 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 PACSIN1Q9BY11 444 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 LZTFL1Q9NQ48 299 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 FAM49BQ9NUQ9 324 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 PTPRSQ13332 1948 aa22.56■■□□□ 1.2
CPNE1-204ENST00000397443 GALTP07902 379 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 PSMC1P62191 440 aaKnown RBP22.55■■□□□ 1.2
CPNE1-204ENST00000397443 LIMS2Q7Z4I7 341 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 TMEM173Q86WV6 379 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-204ENST00000397443 TTC39CQ8N584 583 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms