RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MMS19Q96T76 1030 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 ADAM7Q9H2U9 754 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 METTL14Q9HCE5 456 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 TMEM63CQ9P1W3 806 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 DACH1Q9UI36 760 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 CDH22Q9UJ99 828 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 FAM50BQ9Y247 325 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 STX10O60499 249 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 ABLIM3O94929 683 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 HLA-DRAP01903 254 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 C8AP07357 584 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 GTF2H1P32780 548 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 MXI1P50539 228 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 WDR72Q3MJ13 1102 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 CES5AQ6NT32 575 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 FRMD5Q7Z6J6 570 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 SLC7A14Q8TBB6 771 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 MED15Q96RN5 788 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 SRRTQ9BXP5 876 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 NXF1Q9UBU9 619 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 TCF20Q9UGU0 1960 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 ZMYND10O75800 440 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 WEE2P0C1S8 567 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 ATF2P15336 505 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 TPGS2Q68CL5 300 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 KRT39Q6A163 491 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 RNF19BQ6ZMZ0 732 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 DPH6Q7L8W6 267 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 OSTM1Q86WC4 334 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 CMASQ8NFW8 434 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 TAS1R2Q8TE23 839 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 SUSD6Q92537 303 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 ELMO3Q96BJ8 720 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 PGLYRP2Q96PD5 576 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 VRTNQ9H8Y1 702 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 ZDHHC7Q9NXF8 308 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 DDX43Q9NXZ2 648 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 AFF4Q9UHB7 1163 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 POLIQ9UNA4 740 aa22.73■■□□□ 1.23
TSPAN4-206ENST00000397408 FGFR1OPO95684 399 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 ELF1P32519 619 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 SMAD2Q15796 467 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 ZNF667Q5HYK9 610 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 PPM1LQ5SGD2 360 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 CAVIN1Q6NZI2 390 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 LIMS2Q7Z4I7 341 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 SPATA18Q8TC71 538 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 KBTBD7Q8WVZ9 684 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 SLC35C1Q96A29 364 aa22.72■■□□□ 1.23
TSPAN4-206ENST00000397408 CCDC195A0A1B0GUA6 201 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 PRRG1O14668 218 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 GNA14O95837 355 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 MYL7Q01449 175 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 ADCY1Q08828 1119 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 GPR17Q13304 367 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 CBX2Q14781 532 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 SGSM1Q2NKQ1 1148 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 SASS6Q6UVJ0 657 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 SCARA5Q6ZMJ2 495 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 CCDC149Q6ZUS6 474 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 GPR149Q86SP6 731 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 PI4K2AQ9BTU6 479 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 IMPG2Q9BZV3 1241 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 ZCWPW1Q9H0M4 648 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 CYP4F11Q9HBI6 524 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.71■■□□□ 1.234e-7■■■■■ 121.4
TSPAN4-206ENST00000397408 C5orf42Q9H799 3197 aa22.71■■□□□ 1.23
TSPAN4-206ENST00000397408 GABRDO14764 452 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 SEC24AO95486 1093 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 ASS1P00966 412 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 ACAT1P24752 427 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 ERCC5P28715 1186 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 LHX1P48742 406 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 TSPY1Q01534 308 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 TPD52L1Q16890 204 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 CBWD6Q4V339 395 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 SLC39A12Q504Y0 691 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 CBWD3Q5JTY5 395 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 CBWD5Q5RIA9 395 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 SPOPLQ6IQ16 392 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 SMG7Q92540 1137 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 TAF4BQ92750 862 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 ZNF707Q96C28 371 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 RIPOR3Q96MK2 946 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 MRPL45Q9BRJ2 306 aaKnown RBP22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 SMYD3Q9H7B4 428 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 VCANP13611 3396 aa22.7■■□□□ 1.22
TSPAN4-206ENST00000397408 C2orf16Q68DN1 1984 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 MTMR11A4FU01 709 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 HCRTO43612 131 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 VNN2O95498 520 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 PTMSP20962 102 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 WARSP23381 471 aaKnown RBP22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 HOXA9P31269 272 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 MTHFRP42898 656 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 NOP14P78316 857 aaKnown RBP22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 ATAT1Q5SQI0 421 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 TCEAL8Q8IYN2 117 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 ADAMTS19Q8TE59 1207 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 NECTIN4Q96NY8 510 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 618.2 ms